Miguel wrote:
Todd wrote:
We store our structure files (mol files and CIF files) in database
CLOBs and we're trying to use jmol to display them in a web page. (jmol
version 10.00, Windows 2000, FireFox 1.0). I'd like to use
jmolAppletInline instead of writting a temporary file and then calling
jmolApplet, if possible.
<snip>
Sorry about the lateness of this reply, I was on vacation for a couple of days. Thanks for the tips regarding jmolAppletInline(), I'll see if I can isolate what's happening. Unfortunately, the cif file in question is proprietary and the site is on our corporate intranet, so I can't share either of them. I'll see if I can reproduce the problem with an example molecule from the program that built the cif, Accerlys' Material Studio. If I can, I'll send it to you.A few suggestions:
* Open the java console before loading your web page. It will print out interesting stuff. Look for 'ModelResolver' and see if it is successfully identifying the file as 'cif'
* Newlines are important in cif files. Of course, they are important in .mol files too. So you probably have that taken care of.
* zip up a .cif file and your test .html page and send them to me offline.
* just before calling jmolAppletInline() make a call to jmolDebugAlert()
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