Thanks for that.
In the meantime, I figured out, that by issuing <select oxygen> I can save
lots of clicking, as long as the oxygen atoms=red color is what I want to
select, which I control by the matrx->xyz conversion routine.
Where the indices of those selected O-atoms can be found/passed? Thanks.
Petr
Dr. Petr Pancoska
Department of Pathology
SUNY Stony Brook, NY 11794
phone: (631)-444-3030
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"Miguel"
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Sent by: To
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.net
Subject
[Jmol-users] correlation matrix UI
12/29/2004 05:36
PM
Please respond to
[EMAIL PROTECTED]
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Petr wrote:
> Re linking "correlation" matrix to protein structure rendering - I have
> program that converts my matrices to xyz file and the Jmol rendering is
> just fine (I am finalizing the color scheme).
> You hinted, that there might be a solution how to transfer the picked
> "atoms" in the "correlation matrix rendering" to the protein picture?
Using the JmolStatusListener API you can register a method that will
receive mouse click events.
When the user clicks on an atom you will receive the atom index.
Using the atom index, you can get its x and y coordinates.
In your case, these x & y coordinates map to your residue numbers.
This should allow you to send the appropriate script to your other Jmol
applet.
Miguel
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