Hello,
I have been using Jmol for visualizing simulations of aluminum nanoindentation.
Jmol-10.00 works fine for about 5k-30k atoms, but crashes when I have more than
33,396 atoms. (Thanks to the new renderer, viewing this number of atoms is
quite nimble). Is the maximum number of atoms hard-coded? Is this a bug, or is
there a way to work around the restriction?
A copy of Jmol's output is below. Thanks for any assistance.
Rick Wagner
Materials Research Engineer
National Institute of Standards and Technology
----------------------------------------
Warning: Cannot convert string "MetaCtrl<Key>Insert" to type VirtualBinding
splash_image=jar:file:/u/home6/wagner/Applications/jmol-10.00/Jmol.jar!/org/openscience/jmol/images/Jmol_splash.jpg
using Smarter Model Adapter
(C) 2004 The Jmol Development Team
Jmol Version 10.00 2004/12/17 18:55
java.vendor:Sun Microsystems Inc.
java.version:1.4.2_04
os.name:Linux
User macros dir: /users/wagner/.jmol/macros
exists: false
isDirectory: false
animationReplayMode=0
FileManager.openFile(Data/relax.xyz)
SmarterJmolAdapter:The Resolver thinks:Xyz
openFile(Data/relax.xyz) 1483 ms
uncaught exception: java.lang.ArrayIndexOutOfBoundsException: 64
java.lang.ArrayIndexOutOfBoundsException: 64
at org.jmol.viewer.Bspt$SphereIterator.hasMoreElements(Bspt.java:321)
at org.jmol.viewer.Frame.rebond(Frame.java:1100)
at org.jmol.viewer.Frame.doAutobond(Frame.java:1058)
at org.jmol.viewer.Frame.<init>(Frame.java:188)
at org.jmol.viewer.ModelManager.setClientFile(ModelManager.java:72)
at org.jmol.viewer.Viewer.openClientFile(Viewer.java:1029)
at org.jmol.viewer.Viewer.getOpenFileError1(Viewer.java:1002)
at org.jmol.viewer.Viewer.getOpenFileError(Viewer.java:987)
at org.openscience.jmol.app.Jmol.main(Jmol.java:398)
----------------------------------------
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