> I would like to display a movie of the conformational > motion, but I do not want to have to create an additional > PDB file that is simply a cat'ed version of all the other > output files, as this will essentially double the amount > of space each run requires.
Please explain your concern about doubling the amount of space. For the size data that you are working with, disk space is effectively free. Client performance and network bandwidth are more important. > Does anyone know if it is possible with scripting to load > each of my conformers sequentially, and then display them as an > animation? Someone else asked the same question. I recently changed the code so that loading a new molecule does not clear the old molecule. Therefore, a script that simply alternates load and delay script commands should work load "x000"; delay 0.5; load "x001"; delay 0.5; load "x002"; delay 0.5; You must interleave calls to either 'delay' or 'refresh', otherwise the script will keep running and the display will not get updated. > A results similar to the anim command would be desirable. > Otherwise, I think we'll need to hack something > with php and rpc in order to dynamically create > and destroy a concatenated file for viewing. I suggest: - create the catted file statically - Don't worry about the space - Compress everything with gzip. Miguel ----- Open Source Molecular Visualization www.jmol.org [EMAIL PROTECTED] ----- ------------------------------------------------------- SF.Net email is Sponsored by the Better Software Conference & EXPO September 19-22, 2005 * San Francisco, CA * Development Lifecycle Practices Agile & Plan-Driven Development * Managing Projects & Teams * Testing & QA Security * Process Improvement & Measurement * http://www.sqe.com/bsce5sf _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
