Bob, I insist on my congratulations. The look of these sa-surfaces is excellent and the ability to calculate them from Jmol is a great utility.
Well, I have being working on my interests: surfaces for macromolecules. Clearly, calculation takes very long, in the tens of minutes for very small macromolecules. Sometimes it seems Jmol has hung, but I think it's just busy (100% CPU). Up to now, I have achieved a 17-base pair DNA (701 atoms) and a protein with 876 atoms. Sending the result to console with "show isosurface", then copying the text and saving to a file, this 17 kb jvxl file loads quickly, so one can prepare surfaces for webpage delivery. Those interested, take a look at http://biomodel.uah.es/pruebas/jmol/surface/proto/ (also linked from my page in Jmol Wiki) For the unbelievers, Chime does this sa-surface business far more quickly on-the-fly from the pop-up menu, so there has to be a way. It would be interesting to find a way to optimize the calculations. _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
