stefanie neumann wrote: > hi, when i load my protein and select 2 aminoacids, is it possible to > highlicht the as between theese two as??? > thanks, steffi > As far as I understand your question, you want a method that works with any two selected amino acids, selected for example by user interaction.
Let's say you have a single chain with amino acids 1 to 20. If your two amino acids are 5 and 16, you would want to highlight 6-15. The first step would be to know the selected residue numbers ( if you don't know them already). I am sure that it is possible to get this information from Jmol in the recent prerelease versions, but I am not familiar with this yet. The second step would then be the following selection command: select 5-16 and not selected Since 5 and 16 were already selected before, they would be removed from the selection by "and not selected". The last step would then be to highlight the selected residues as you like. If this doesn't help you, you should give a concrete example so that I could try to write the whole script for your example. Regards, Rolf ------------------------------------------------------------------------- Take Surveys. Earn Cash. Influence the Future of IT Join SourceForge.net's Techsay panel and you'll get the chance to share your opinions on IT & business topics through brief surveys-and earn cash http://www.techsay.com/default.php?page=join.php&p=sourceforge&CID=DEVDEV _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
