Hi Daniel, and welcome to the exciting Jmol world :-)
> Anyways, I have this error on my page that says:
> codebaseDirectory is a required parameter to jmolInitialize
> I am already aware that the problem is because my jmolinitialize call
> looks like this:
> jmolInitialize("");
For the current directory/folder, use a dot or dot+slash:
jmolInitialize(".");
jmolInitialize("./");
> viewing the models. If the models are in a different directory I
> couldnt figure out how to get it to work.
It will work as long as the models are together or below the Jmol jar
files.
For ex., you can have
mypage.html
JmolApplet0.jar
models/mymodel.pdb
then you do:
jmolInitialize(".");
jmolApplet(300,"load models/mymodel.pdb;")
or
JmolApplet0.jar
models/mymodel.pdb
models/mypage.html
then you do:
jmolInitialize("../");
jmolApplet(300,"load mymodel.pdb;")
This is documented at
http://jmol.sourceforge.net/jslibrary/
(hopefully it's clear; if you think it can be improved, just tell me
how)
Don't hesitate to write if you have any more trouble
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