They are all already connected; that's not the problem. The problem is with:
"cpk 0; wireframe 0; select none; select symop="+whichSymmetry()+"; cpk 15%; wireframe 0.10;" You are turning on and off atoms using cpk and wireframe instead of just display. What you want is something like: "display none; select symop="+whichSymmetry()+"; display selected;" or maybe "display none; select selected or symop="+whichSymmetry()+"; display selected;" I'm not sure. But the point is that you are setting "cpk 0; wireframe 0" and then not setting it back on. Maybe all you need is: "cpk 0; wireframe 0; select radius > 0 or symop="+whichSymmetry()+"; cpk 15%; wireframe 0.10;" "radius > 0" selects for atoms for which you have not turned off using cpk 0. Bob P.J. Carroll wrote: > I need some scripting help (Again!) I've been writing pages >to draw unit cell packing diagrams. Sometimes an added symop should >be bonded to an already-displayed one. For example, in > > http://macxray.chem.upenn.edu/gam/9129b.html > >if you add symmetry operation -x, -y, -z with a translation of +1, >+1, +1, the new fragment should be bonded to the first fragment. I >assume I need to use the "connect" command, but I'm not clear on how. > > >Pat Carroll >U Penn X-ray Facility >Phila, PA > >------------------------------------------------------------------------- >This SF.net email is sponsored by DB2 Express >Download DB2 Express C - the FREE version of DB2 express and take >control of your XML. No limits. Just data. Click to get it now. >http://sourceforge.net/powerbar/db2/ >_______________________________________________ >Jmol-users mailing list >[email protected] >https://lists.sourceforge.net/lists/listinfo/jmol-users > > ------------------------------------------------------------------------- This SF.net email is sponsored by DB2 Express Download DB2 Express C - the FREE version of DB2 express and take control of your XML. No limits. Just data. Click to get it now. http://sourceforge.net/powerbar/db2/ _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
