There is no "user-derived palette" of colors. However, if you can use
one of the color schemes we have, you can set a property of the atoms
using the Data command, and then color by that using the standard
palette. You would have to figure out what value corresponds to what
color -- say, on a 0-100 scale -- and then use that number. Might work.

Bob Hanson


Garnier Nicolas wrote:

> hi,
> I'm using Jmol with proteins that can be more than 800 residues. I
> have some specific colorations where each residues can take a color.
> So it's very long to color each residues by a select x; color y;.....
> command. Is there a way to create his own coloration such "color
> structure;" or is there a specific syntax for a faster execution
> because i often have to reload this coloration.
> Thanks for reply
> Nicolas
>
> -- 
> 明日は明日の風が吹く
> -- ashita wa ashita no kaze ga fuku --
>
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-- 
Robert M. Hanson
Professor of Chemistry
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr


If nature does not answer first what we want,
it is better to take what answer we get. 

-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900



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