[EMAIL PROTECTED] wrote:
>
>Have you tried opening the URL included as "documentBase" at the
>beginning of the state script:
>"http://www.fli-leibniz.de/cgi-bin/3d_mapping-rh.pl?CODE=1deh&VIEW=exon&JMOLVERSION=11.3.38";?
>
>After loading it you should maybe reorient the molecule with this command:
>moveto /* time, axisAngle */ 1.0 { 839 -522 -153 93.03} /* zoom,
>translation */ 107.02 0.0 0.0 /* center, rotationRadius */
>{-0.37650013 2.6524982 -47.993996} 57.647785 /* navigation center,
>translation, depth */ {0.0 0.0 0.0} -27.864134 33.94326 50.0;
>
>And then just press the "snapshot" button in the "Graphics Window" section.
>
>
OK, Rolf, this is cookin'.
ooooooh. You mean like THIS?
moveto /* time, axisAngle */ 1.0 { 797 90 -597 134.77} /* zoom,
translation */ 211.89 0.0 0.0 /* center, rotationRadius */
{-0.37650013 2.6524982 -47.993996} 57.647785 /* navigation center,
translation, depth */ {0.0 0.0 0.0} -57.95577 1.4490051 50.0;
cartoons on;backbone off
hermitelevel = 5
antialiasDisplay = true
antialiasTranslucent = true
[snapshot]
http://www.stolaf.edu/people/hansonr/temp/jmol/1DEH-snapshot_27486.jpg
without the antialiasTranslucent:
http://www.stolaf.edu/people/hansonr/temp/jmol/1DEH-snapshot_27344.jpg
[note the ragged edges around the translucent diamonds embedded in the blue
helix regions.]
:)
--
Robert M. Hanson
Professor of Chemistry
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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