http://www.umass.edu/molvis/bme3d/materials/jmoltuts/antibody/contents/contents.htm
Jmol Version 11.3.13 2007-08-28 16:07
really?
Bob
On Mon, Sep 8, 2008 at 10:15 PM, Eric Martz <[EMAIL PROTECTED]>wrote:
> At long last, I have completed a version of the Jmol
> Tutorial-Authoring Template (JTAT) that I believe to be adequately
> documented, and fully functional
> (http://bioinformatics.org/jmol-tutorials). Improvements since I last
> put up a pre-release version (July 2008):
>
> - Documentation on how to use the template, color key functions,
> etc. to author a tutorial has been completed.
>
> - A new chapter on DRuMS Color Schemes has been added to the JTAT
> Demonostration Tutorial.
>
> - The chapter on Animations and Movies in the JTAT Demonstration
> Tutorial has been clarified.
>
> - Functions are provided to easily generate standard color keys,
> and scripts are provided to apply the standard color schemes to
> molecular views. A Quick Reference page for color HTML is provided.
>
> - Support for checkboxes that modify the molecular view. Example:
> View 1 in the Demo Tutorial chapter on Color Schemes.
>
> - After centering an atom by clicking on it, the next time "Center
> Clicked" is checked, a new button appears for re-centering the entire
> molecule.
>
> - The links (at the bottom of every page in a tutorial) for further
> exploration of the molecules in the tutorial now support links to
> FirstGlance in Jmol that display modified or customized PDB files
> included in the tutorial, as well as the usual published PDB codes.
>
> - Jmol applet has been updated to the current version (11.6.RC12).
>
> Of course, the entire template and website is downloadable in a
> single file, jtat.zip.
>
> Caveat: I will be away from email until after September 20. Any
> questions, feedback, or things that I botched up will have to wait
> till after I get back.
>
> -Eric
>
> /* - - - - - - - - - - - - - - - - - - - - - - - - - - -
> Eric Martz, Professor Emeritus, Dept Microbiology
> U Mass, Amherst -- http://www.umass.edu/molvis/martz
>
> Top Five 3D MolVis Technologies http://Top5.MolviZ.Org
> 3D Wiki with Scene-Authoring Tools http://Proteopedia.Org
> Biochem 3D Education Resources http://MolviZ.org
> See 3D Molecules, Install Nothing! - http://firstglance.jmol.org
> Protein Explorer - 3D Visualization: http://proteinexplorer.org
> Workshops: http://workshops.proteinexplorer.org
> World Index of Molecular Visualization Resources: http://molvisindex.org
> ConSurf - Find Conserved Patches in Proteins: http://consurf.tau.ac.il
> Atlas of Macromolecules: http://atlas.proteinexplorer.org
> PDB Lite Macromolecule Finder: http://pdblite.org
> Molecular Visualization EMail List (molvis-list):
> http://bioinformatics.org/mailman/listinfo/molvis-list
> - - - - - - - - - - - - - - - - - - - - - - - - - - - */
>
>
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--
Robert M. Hanson
Professor of Chemistry
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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