OK, then I think we have the capability now of creating Jmol video movies.
The addition to Jmol, to be in 11.7, not 11.6, is;
write frames {xxx} "movie0000.jpg"
{xxx} is some atom expression, such as {*} (all frames) or {1.0} (all models
in the first file) or {1.1,1.3,1.5} (three specific frames). Files will be
created by replacing "0000" with "0001" "0002" etc. as necessary, creating a
set of image files (JPEG in this case).
What you do with those files is up to you. I loaded them into VideoMach just
to see if it could handle them, which it did, apparently. I purposely set
the frame rate very high. But there are plenty of utilities out there that
can do this. Maybe someone with more experience can fill us in on a few of
the options.
Bob
On Sun, Oct 5, 2008 at 9:38 AM, Rich <[EMAIL PROTECTED]> wrote:
> No problem seeing it here Bob (OSX 10.4.11, Camino 1.6.4 with QT 7.5.5
> with the Xvid codec). I did re-export it as an image sequence (145
> images) and created a new movie at 2 fps (using QT) to make it more
> easily watched. There are some rather odd H atoms wandering
> around/displayed which I'm assuming are the result of some strangeness
> in the MD calculations rather than coming from Jmol
>
> Rich
>
> On 1-10-2008 13:25, Robert Hanson wrote:
> > Question: Can you watch this movie on your machine? If so, how's the
> > resolution?
> >
> > http://www.stolaf.edu/people/hansonr/temp/rasraf.avi
> >
> > It's supposed to be 145 frames of a molecular dynamics calculation. It
> was
> > created using the following Jmol script followed by running a program
> called
> > VideoMach:
>
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--
Robert M. Hanson
Professor of Chemistry
St. Olaf College
1520 St. Olaf Ave.
Northfield, MN 55057
http://www.stolaf.edu/people/hansonr
phone: 507-786-3107
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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