>> I'd rather look for an external way to build the multi-model file.
That's exactly what I'm looking for. I'd found the website of chemtube3d, but
that's not what I can use in my lessons.
Anyone else with idea's to make movies?
Arjan
----- Original Message -----
From: Angel Herráez
To: A. Dijkman ; [email protected]
Sent: Saturday, December 06, 2008 7:25 PM
Subject: Re: [Jmol-users] Making movies
Hello Arjan
> My question:
> I'd like to make a movie of an esterification where molecules/atoms of the
reactants move to
> form the ester. I've been searching the net now for 2 days, but I cannot
find any documentation
> on this. Maybe I'm searching in the wrong place, so I've turned to you. I
downloaded a xyz-file
> and included it in this message, to give you an idea of my intentions.
> Is there a program to make these files or do I have to start understanding
the script (yes, I know,
> that's probably a good idea anyway:-])
Yes, the problem is building the multi-model file for your reaction, similar
to the one you downloaded. But that's not a Jmol task. Jmol will just
display-animate the model once you have it built. There is little you can learn
from scripting, apart from the way to play the animation.
I do not know of a program that you can use to build the model.
In fact, the thing MAY be done using Jmol scripting, as it can move atoms
around, but that's not trivial at all. I'd rather look for an external way to
build the multi-model file.
There are a few websites that have animated mechanisms of reaction. Maybe you
can find yours already built there.
Please check out sites at
http://wiki.jmol.org/index.php/Websites_Using_Jmol
I particularly suggest ChemTube3D, by Nick Greeves. For example:
http://www.chemtube3d.com/Nucleophilic%20substitution%20at%20the%20carbonyl%20group%20-%20Acid-catalysed%20ester%20hydrolysis%20and%20transesterification.html
Once you've got your model, you may come back to this list if you need help
with playing the animation. I (we) will be glad to help you.
Good luck!
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