Hi Sergey
Yes, it think it can be done. I haven't worked with cube files, but I have done
coloring by Z in
math functions. You must use the keyword "map" in "isosurface" and, after that,
repeat the
parameters given for the surface.
There should be info on this in the jmol-users list archive.
This is my example, see if you can adapt it to your case:
isosurface myS functionXY "myF" {x y z} {-50 1 0 0) {50 0 1 0} {23 0 0 1}
fullyLit map functionXY "myF" {x y z} {-50 1 0 0) {50 0 1 0} {23 0 0 1}
So, you may try something like
isosurface value -0.6 "filename.cube" map "filename.cube"
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