Rolf is right.
In full, the atom expression spec is:
[residueType]seqRange ^insertionCode :chainLetter .atomName %altLoc /modelNumber
(quoted from
http://www.stolaf.edu/academics/chemapps/jmol/docs/#atomexpressions)
and in parts:
pdb columns in Jmol
7 - 11 = Atom serial number select atomNo= myNumber
13 - 16 = Atom name select *.myName
17 = Alternate location indicator select %myLetter
18 - 20 = Residue name select myRes
22 = Chain identifier select *:myChain
23 - 26 = Residue sequence number select myNumber
27 = Code for insertion of residues select ^myLetter
So, in Zengming's example,
to select residue CYS:
select CYS1 or select CYS1:L
if you use
select 1:L
you probably get both residues.
And to select residue ASP:
select ASP1 or select ASP1:L
I think that should do, but you can do the more specific way:
select ASP1^A or select ASP1^A:L
or you probably can do too
select 1^A or select 1^A:L
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