I am trying to load two PDB files, color them differently, and show both of them. I can now do 2 of the 3, but not 3 at once. I expect the problem lies with a missing "select" or "frame" statement, but my best guesses as to how to do this have not revealed a solution. Suggestions are welcome. My current script looks like:

jmolApplet(400, 'load FILES "A.pdb" "B.pdb"; cpk off; wireframe off; cartoon; select model=1.1; color red; select model=2.1; color=blue; select all; frame 0.0');

This shows the first structure A.pdb in red, but B.pdb is only displayed after I explicitly select it via the Jmol menu, and it turns up grey instead of blue (grey is actually fine).

Ian

--
Ian Stokes-Rees                            W: http://sbgrid.org
[email protected]               T: +1 617 432-5608 x75
SBGrid, Harvard Medical School             F: +1 617 432-5600


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