Jmol's rendering appears to me to become very slow at high zoom, when 
there are many atoms outside the viewport. That is, spinning and 
zooming get slow and jerky. For example,

http://proteopedia.org/wiki/index.php/User:Eric_Martz/Molecular_Playground/Tamiflu

Click the "Play Animation" button. Near the end of the animation, the 
protein appears as green cartoon, at high zoom. Prior to the green 
cartoon appearing, the large spacefilled Tamiflu Drug spins smoothly 
(even tho antialiasdisplay is on). The moment the green cartoon 
appears, spinning becomes slow and jerky. As the molecule zooms down, 
when the entire protein and cartoon are within the viewport, spinning 
and zooming again become much faster and smoother.

My guess is that at high zoom, Jmol is spending lots of time 
rendering structure that is outside the viewport and will not be 
shown. If this guess is correct, would it be feasible to code Jmol to 
skip rendering the out-of-viewport portions, to improve performance?

Thanks, -Eric


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