In this case, we probably just have a slightly different version of NWChem
being used. Jorg, be sure to indicate that when you send me that file. Let's
get this working.

2009/12/1 Angel Herráez <[email protected]>

> This happens at times with pdb files that have the wrong position of atom
> IDs (typically,
> shifted by one column position). Jmol does not identify the element, then
> makes it unknown,
> with is colored pink and sized as a smallish sphere.
> Don't know how the NWChem specifies the element, but looks a similar
> problem. The file
> open parser is the likely culprit (well, it really is the file writer).
>
>
>
> ------------------------------------------------------------------------------
> Join us December 9, 2009 for the Red Hat Virtual Experience,
> a free event focused on virtualization and cloud computing.
> Attend in-depth sessions from your desk. Your couch. Anywhere.
> http://p.sf.net/sfu/redhat-sfdev2dev
> _______________________________________________
> Jmol-users mailing list
> [email protected]
> https://lists.sourceforge.net/lists/listinfo/jmol-users
>



-- 
Robert M. Hanson
Professor of Chemistry
St. Olaf College
1520 St. Olaf Ave.
Northfield, MN 55057
http://www.stolaf.edu/people/hansonr
phone: 507-786-3107


If nature does not answer first what we want,
it is better to take what answer we get.

-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
------------------------------------------------------------------------------
Join us December 9, 2009 for the Red Hat Virtual Experience,
a free event focused on virtualization and cloud computing. 
Attend in-depth sessions from your desk. Your couch. Anywhere.
http://p.sf.net/sfu/redhat-sfdev2dev
_______________________________________________
Jmol-users mailing list
[email protected]
https://lists.sourceforge.net/lists/listinfo/jmol-users

Reply via email to