Why would there be any compatibility issue, Jonathan? There should not be
any. Please let me know of any you are aware of.

Bob

On Tue, Dec 15, 2009 at 8:00 PM, Jonathan Gutow <[email protected]> wrote:

> Bob,
>        I would like to use some of these things, but first I am trying to
> understand how to get things to work inside of their server.  I've had
> to work around some issues with asynchronous updates coming from the
> server.  The other issue is that significant SAGE code will have to be
> rewritten to take advantage of this.  I'm trying to provide a smooth
> upgrade path that won't break worksheets produced in older versions of
> SAGE.  At present SAGE ships with 11.6.  I'm trying to migrate safely
> to 11.8 and when we release 11.10 so that there is a stable set of
> features, I will urge them to switch to that.  Now that I've dealt
> with some of their initial problems, I can also get a better list of
> what needs to be done.  What I think we want to do is define a plot
> primitive and have that generated in SAGE, rather than having them
> produce .pmesh (as they do now) or .jvxl as we've talked about some.
> On Dec 15, 2009, at 5:51 PM, [email protected]
> wrote:
>
> > Date: Tue, 15 Dec 2009 17:51:06 -0600
> > From: Robert Hanson <[email protected]>
> > Subject: Re: [Jmol-users] first peak at update to Jmol in SAGE (3-D
> >       function        plotting)...
> > To: [email protected]
> > Message-ID:
> >       <[email protected]>
> > Content-Type: text/plain; charset="iso-8859-1"
> >
> > Jonathan,
> >
> > Here's an easy improvement -- use antialiasdisplay. It looks REALLY
> > nice
> > with those graphs.
> Good idea.  Hadn't thought of that.  What about the z-shade stuff
> (11.9 right?:().
> >
> > Say, is that a custom menu?
> Yes, it is the custom menu that was generated for the SAGE notebook a
> while ago.  I haven't modified it, although I think it should be made
> to match the web interface features.  I'm waiting for feedback on what
> they want.
> >
> > One of the reasons that they might want to use Jmol 11.9.12 is that it
> > includes the capability of drawing the intersection of an isosurface
> > with a
> > plane. That means that they could be drawing lines on the surface that
> > correspond with x, y, and/or z values. For example,
> >
> > isosurface iso1 PMESH "xxxxx.pmesh" ....
> >
> > (isosurface and pmesh were merged in Jmol 11.7.12)
> >
> > then
> >
> > draw line1 width 0.1 intersection $iso1 x=1
> > draw line2 width 0.1 intersection $iso1 x=2
> > draw line3 width 0.1 intersection $iso1 x=3
> >
> > etc.
> >
> > would draw the expected contour lines. A set of these in two
> > directions
> > would produce a standard grid-like mapping onto the pmesh. These
> > lines,
> > because they are draw objects, could be sized and colored
> > appropriately and
> > look very classy.
> >
> >
> >
> > Bob
>
>                          Dr. Jonathan H. Gutow
> Chemistry Department                                 [email protected]
> UW-Oshkosh                                           Office:920-424-1326
> 800 Algoma Boulevard                                 FAX:920-424-2042
> Oshkosh, WI 54901
>                  http://www.uwosh.edu/facstaff/gutow
>
>
>
>
>
>
>
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-- 
Robert M. Hanson
Professor of Chemistry
St. Olaf College
1520 St. Olaf Ave.
Northfield, MN 55057
http://www.stolaf.edu/people/hansonr
phone: 507-786-3107


If nature does not answer first what we want,
it is better to take what answer we get.

-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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