Hi,
----- Ursprüngliche Mail ----- > Von: "Robert Hanson" <[email protected]> > An: [email protected] > Gesendet: Samstag, 10. Juli 2010 15:34:04 > Betreff: Re: [Jmol-users] write function in the applet > all these appear to be working properly now in Jmol 12.0.RC24 > > works for me, and thank you for fixing it in 11.8.25 too. Alex > On Fri, Jul 9, 2010 at 11:54 AM, Alexander Rose < > [email protected] > wrote: > > > applet (RC20, the RC above that tend to freeze, but I haven't look > into that): > > jmolEvaluate('write("coords","pdb")') -> ERROR > jmolEvaluate('write("coords","PDB")') -> ERROR > jmolEvaluate('write("coords")') -> works > jmolEvaluate('write("coords", "XYZ")') -> works > jmolEvaluate('write("coords", "xyz")') -> works > jmolEvaluate('write("COORDS")') -> JPG64 > > > application (RC23): > > write COORDS PDB "struc.pdb" -> works > write("coords") -> creates an image > write("COORDS") -> creates an image > write("ramachandran") -> creates an image > write ZIPALL "zipall.zip" -> Users/alexrose/3cap.pdb (No such file or > directory) > > > best alex > > > ----- Ursprüngliche Mail ----- > > Von: "Robert Hanson" < [email protected] > > > An: [email protected] > > Gesendet: Freitag, 9. Juli 2010 15:57:08 > > Betreff: Re: [Jmol-users] write function in the applet > > > > > On Fri, Jul 9, 2010 at 8:34 AM, Robert Hanson < [email protected] > > > wrote: > > > > > > > > > > > > > > On Fri, Jul 9, 2010 at 5:43 AM, Alexander Rose < > > [email protected] > wrote: > > > > > > Hi everyone, > > > > I'm trying to use the write function in the applet. It is advertised > > to do: > > > > "x = write(...), the output of the write command is loaded into > > variable x. The parameters are those of the write command. For > > example, x = write("PDB") or x = write(quaternion, "r", > > "difference2"). Note that x = write("image") is not supported." > > > > > > I tried this with 11.8.24 and 12.0.RC20/23, both signed and > > unsigned: > > > > jmolEvaluate('write("ramachandran","r").split("\n");') > > > > - getting the ramachadran 'pdb' string works fine > > > > > > jmolEvaluate('write("PDB");') > > > > > > > > oooh, you wouldn't want to do that. What were you expecting that to > > do? The write command produces a structure file; jmolEvaluate is > > expecting a math expression. > > > > > > > > Ignore me. Sure, that's fine. :) > > > > > > > > > > > > By the way, if you are doing this sort of testing, I recommend using > > the Jmol application, not the applet, at least to check out scripts. > > > > > > > > > > - returns 'ERROR' > > > > > > jmolEvaluate('write("COORDS", "PDB");') > > > > > > > > ah, thanks. Just an upper-case/lower-case issue. For now you must > > use > > "coords" not "COORDS", but I've fixed it for Jmol 12.0.RC24. > > > > > > > > > > > > - returns 'JPG64' > > > > > > Any ideas?! > > > > > > Cheers > > Alex > > > > ------------------------------------------------------------------------------ > > This SF.net email is sponsored by Sprint > > What will you do first with EVO, the first 4G phone? > > Visit sprint.com/first -- http://p.sf.net/sfu/sprint-com-first > > _______________________________________________ > > Jmol-users mailing list > > [email protected] > > https://lists.sourceforge.net/lists/listinfo/jmol-users > > > > > > > > -- > > Robert M. Hanson > > Professor of Chemistry > > St. Olaf College > > 1520 St. Olaf Ave. > > Northfield, MN 55057 > > http://www.stolaf.edu/people/hansonr > > phone: 507-786-3107 > > > > > > If nature does not answer first what we want, > > it is better to take what answer we get. > > > > -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 > > > > > > > > -- > > Robert M. Hanson > > Professor of Chemistry > > St. Olaf College > > 1520 St. Olaf Ave. > > Northfield, MN 55057 > > http://www.stolaf.edu/people/hansonr > > phone: 507-786-3107 > > > > > > If nature does not answer first what we want, > > it is better to take what answer we get. > > > > -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 > > > > ------------------------------------------------------------------------------ > > This SF.net email is sponsored by Sprint > > What will you do first with EVO, the first 4G phone? > > Visit sprint.com/first -- http://p.sf.net/sfu/sprint-com-first > > _______________________________________________ > > Jmol-users mailing list > > [email protected] > > https://lists.sourceforge.net/lists/listinfo/jmol-users > > ------------------------------------------------------------------------------ > This SF.net email is sponsored by Sprint > What will you do first with EVO, the first 4G phone? > Visit sprint.com/first -- http://p.sf.net/sfu/sprint-com-first > _______________________________________________ > Jmol-users mailing list > [email protected] > https://lists.sourceforge.net/lists/listinfo/jmol-users > > > > -- > Robert M. Hanson > Professor of Chemistry > St. Olaf College > 1520 St. Olaf Ave. > Northfield, MN 55057 > http://www.stolaf.edu/people/hansonr > phone: 507-786-3107 > > > If nature does not answer first what we want, > it is better to take what answer we get. > > -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 > > ------------------------------------------------------------------------------ > This SF.net email is sponsored by Sprint > What will you do first with EVO, the first 4G phone? > Visit sprint.com/first -- http://p.sf.net/sfu/sprint-com-first > _______________________________________________ > Jmol-users mailing list > [email protected] > https://lists.sourceforge.net/lists/listinfo/jmol-users ------------------------------------------------------------------------------ This SF.net email is sponsored by Sprint What will you do first with EVO, the first 4G phone? 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