Interesting. Yes, it's doing:
select (*) and ( not 56 ) and :B
instead of
select (*) and not (56 and :B)
Which is correct for standard math --
a and !b and c = a and (!b) and c
But, sure enough, that's different in this case. Components of a chain have
a higher-priority "and" that should be done first.
It's fixed. This shows up specifically with
..... ! [mutli-part residue specification] ....
Bob
On Wed, Jul 21, 2010 at 8:18 AM, Paul Pillot <
paul.pil...@ac-orleans-tours.fr> wrote:
> I've just encountered a bug with a script that selects or deselects
> previously selected residue.
>
> Example : on http://chemapps.stolaf.edu/jmol/docs/examples-11/new.htmload a
> multiple chain pdb file (as 1d66)
> - set selectionhalos on (to make things clearer)
> - select selected and not 56:B
> chains A, D and E are deselected as well as amino acid 56:B
>
> This command works fine with one chain only files
>
> -Paul
>
>
>
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--
Robert M. Hanson
Professor of Chemistry
St. Olaf College
1520 St. Olaf Ave.
Northfield, MN 55057
http://www.stolaf.edu/people/hansonr
phone: 507-786-3107
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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