Sweet! Wonder what's different about 4.0?

On Mon, Aug 16, 2010 at 4:37 PM, Alexander Rose <alexander.r...@weirdbyte.de
> wrote:

> Hi,
>
> Am 16.08.2010 um 17:48 schrieb Philip Bays:
>
> > This seems to be another example of Mac Firefox (and I suspect Camino and
> SeaMonkey) behaving differently.  I would be interested in the results of
> the following three experiments:
> >
> > 1. What happens if you use the signed rather than the unsigned applet?
> >
>
> still slow: http://weirdbyte.de/jmol-test/html/slow_callbacks_signed.html
>
> > 2. What happens if you remove the javaembedding plugin files
> (Firefox>contents>MacOS>Plugins)?  There are two: JavaEmbeddingPlugin and
> MRJplugin.  Don't throw them away, since once removed manipulating the
> structure in the applet will be disabled.   But does it affect the callback
> speed.
> >
>
> both removed: fast, but callbacks seem to be ignored, no messages
> JavaEmbeddingPlugin removed: Error _jmolSetCodebase is not defined
> MRJplugin removed: 1st load opens a program called Java Applet Host, fast,
> but callbacks seem to be ignored, 2nd & subsequent loads (with Java Applet
> Host program open), fast callbacks with messages
>
>
> > 3. What happens if you use Firefox 4.0b3 to open the page?
> >
>
> first, there is a warning the browser would not be fully compatible with
> jmol, but nevermind, because...
> ... the slow callbacks are gone :-)
>
> Alex
>
> >
> > Phil Bays
> >
> >
> >
> > On Aug 16, 2010, at 9:50 AM, Alexander Rose wrote:
> >
> >> Hi,
> >>
> >> does someone else experience painfully slow callbacks in firefox on mac
> osx?
> >>
> >> http://weirdbyte.de/jmol-test/html/slow_callbacks.html
> >>
> >> I did some measurements. The numbers do very, but there is always a huge
> difference between callbacks registered and not.
> >>
> >> Best
> >> Alexander
> >>
> >>
> >> The numbers:
> >>
> >> * Firefox 2.6.8 on Mac OSX 10.6.4:
> >>
> >> === NO CALLBACKS REGISTERED ===
> >> START load pdb: 3:10:09.660
> >> END load pdb: 3:10:10.155
> >> DURATION [495 ms]load pdb
> >> START load append pdb: 3:10:10.158
> >> END load append pdb: 3:10:10.510
> >> DURATION [352 ms]load append pdb
> >>
> >> === CALLBACKS REGISTERED ===
> >> START load pdb: 3:10:10.652
> >> jmol_anim_frame_callback: jmolApplet0
> http://weirdbyte.de/jmol-test/data/1u19.pdb 1u19.pdb 1U19 null 3 1.1
> >> jmol_load_struct_callback: 3:10:19.638
> >> jmol_anim_frame_callback: jmolApplet0 0 1 1 1000001 1000001 0 1 1
> >> jmol_anim_frame_callback: 3:10:19.705
> >> jmol_anim_frame_callback: jmolApplet0 0 0 0 0 0 0 1 1
> >> jmol_anim_frame_callback: 3:10:19.763
> >> jmol_anim_frame_callback: jmolApplet0 0 1 1 1000001 2000001 0 1 1
> >> jmol_anim_frame_callback: 3:10:19.821
> >> END load pdb: 3:10:19.857
> >> DURATION [9205 ms]load pdb
> >> START load append pdb: 3:10:19.862
> >> jmol_anim_frame_callback: jmolApplet0 1 2 1 1000001 2000001 0 1 1
> >> jmol_anim_frame_callback: 3:10:24.416
> >> jmol_anim_frame_callback: jmolApplet0
> http://weirdbyte.de/jmol-test/data/1u19.pdb 1u19.pdb 1U19 (modified) null
> 3 1.1
> >> jmol_load_struct_callback: 3:10:24.420
> >> END load append pdb: 3:10:24.423
> >> DURATION [4561 ms]load append pdb
> >>
> >>
> >>
> >> * Safari 5.0.1 on Mac OSX 10.6.4:
> >>
> >> === NO CALLBACKS REGISTERED ===
> >> START load pdb:  3:45:35.845
> >> END load pdb:  3:45:36.496
> >> DURATION [651 ms]load pdb
> >> START load append pdb:  3:45:36.497
> >> END load append pdb:  3:45:36.734
> >> DURATION [237 ms]load append pdb
> >>
> >> === CALLBACKS REGISTERED ===
> >> START load pdb:  3:45:36.782
> >> jmol_anim_frame_callback:  jmolApplet0 0 1 1 1000001 2000001 0 1 1
> >> jmol_anim_frame_callback:  3:45:36.801
> >> jmol_anim_frame_callback:  jmolApplet0 0 0 0 0 0 0 1 1
> >> jmol_anim_frame_callback:  3:45:36.935
> >> jmol_anim_frame_callback:  jmolApplet0 0 1 1 1000001 1000001 0 1 1
> >> jmol_anim_frame_callback:  3:45:36.989
> >> jmol_anim_frame_callback:  jmolApplet0
> http://weirdbyte.de/jmol-test/data/1u19.pdb 1u19.pdb 1U19 3 1.1 1.1
> >> jmol_load_struct_callback:  3:45:37.000
> >> END load pdb:  3:45:37.161
> >> DURATION [379 ms]load pdb
> >> START load append pdb:  3:45:37.161
> >> jmol_anim_frame_callback:  jmolApplet0
> http://weirdbyte.de/jmol-test/data/1u19.pdb 1u19.pdb 1U19 (modified) 3 1.1
> 2.1
> >> jmol_load_struct_callback:  3:45:37.230
> >> jmol_anim_frame_callback:  jmolApplet0 1 2 1 1000001 2000001 0 1 1
> >> jmol_anim_frame_callback:  3:45:37.360
> >> END load append pdb:  3:45:37.408
> >> DURATION [247 ms]load append pdb
> >> jmol_anim_frame_callback:  jmolApplet0 0 1 1 1000001 2000001 0 1 1
> >> jmol_anim_frame_callback:  3:45:37.430
> >> jmol_anim_frame_callback:  jmolApplet0 -1 0 0 1000001 2000001 0 1 1
> >> jmol_anim_frame_callback:  3:45:37.437
> >>
> >>
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> >
> > J. Philip Bays
> > Professor of Chemistry
> > Department of Chemistry and Physics
> > Saint Mary's College
> > Notre Dame, IN 46556
> > (574) 284-4663
> > pb...@saintmarys.edu
> >
> >
> >
> >
> >
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-- 
Mike Evans
Organic Chemistry Graduate Student
Moore Group
University of Illinois, Urbana-Champaign
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