Am I correct that it is not possible to put Jmol on a page in wiki.jmol.org?
Clearly, it would be useful to show examples. Is there another wiki that is appropriate to show examples in Jmol of how Jmol works? ----------- Possibly Proteopedia could be used for this purpose, but (i) its Jmol version lags behind because updating requires careful testing and often some changes to the Molecular Scene Authoring Tools, and (ii) the state scripts saved automatically by the Molecular Scene Authoring Tools are modified by routines in Proteopedia. These modifications sometimes affect the display in Jmol. However, it is possible to upload a script file to Proteopedia and run it with a button. This can be used to bypass the state-script saving/modifying mechansim. It is especially useful when the script is designed to play a series of scenes with transitions. The Molecular Scene Authoring Tools can show only a single state of Jmol -- this is usually a single scene, but can include a scene with "animation on". Example of a scene with animation on: http://proteopedia.org/wiki/index.php/Morphs Example of using a button to play an uploaded script: http://proteopedia.org/wiki/index.php/Molecular_Playground/HIV_Protease_Inhibitor (Note: some of the echos/labels in this animation are unreadable due to a temporary bug. Jmol is supposed to be rectangular, not square, on this page. This used to work but recently has been broken. I have submitted a request for it to be fixed to the Proteopedia team.) -Eric ------------------------------------------------------------------------------ Start uncovering the many advantages of virtual appliances and start using them to simplify application deployment and accelerate your shift to cloud computing. http://p.sf.net/sfu/novell-sfdev2dev _______________________________________________ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
