OK, thanks, Alexander. I see. Dots are not properly being filtered with isosurface SET or isosurface POCKET, and isosurface POCKET and SASURFACE got broken in this last installment of Jmol 12.1.
Fixed for Jmol 12.1.30 and 12.0.27. Corrected 12.1.30 is at http://chemapps.stolaf.edu/jmol/docs/examples-12/Jmol-12.zip Bob On Sun, Jan 9, 2011 at 7:08 PM, Robert Hanson <[email protected]> wrote: > Oh, I see them now. Hmm... > > > On Sun, Jan 9, 2011 at 7:04 PM, Robert Hanson <[email protected]> wrote: > >> >> >> On Sun, Jan 9, 2011 at 5:49 PM, Alexander Rose < >> [email protected]> wrote: >> >>> >>> I drew them (http://dl.dropbox.com/u/3778149/1crn_surface-points.jmol) >>> and notices that there are a lot of points in addition to the vertices of >>> the triangles that make up the surface. What are they? Can I get rid of >>> them? >>> >>> >> They are all surface points, and they are all parts of triangles. >> >> >>> Is there a way to get only the vertices of a specific fragment? >>> >>> >> Hmm, no I don't think so. >> >> >>> What surface in terms of an 'isosurface' command do 'calculate >>> SURFACEDISTANCE FROM/WITHIN' use? Or is this based on some other >>> calculation? >>> >>> >> Totally different. >> >> >>> >>> Best >>> Alexander >>> >>> > >>> > Best >>> > Alexander >>> > >>> > >>> ------------------------------------------------------------------------------ >>> > Lotusphere 2011 >>> > Register now for Lotusphere 2011 and learn how >>> > to connect the dots, take your collaborative environment >>> > to the next level, and enter the era of Social Business. >>> > http://p.sf.net/sfu/lotusphere-d2d >>> > _______________________________________________ >>> > Jmol-users mailing list >>> > [email protected] >>> > https://lists.sourceforge.net/lists/listinfo/jmol-users >>> > >>> > >>> > >>> > >>> > -- >>> > Robert M. Hanson >>> > Professor of Chemistry >>> > St. Olaf College >>> > 1520 St. Olaf Ave. >>> > Northfield, MN 55057 >>> > http://www.stolaf.edu/people/hansonr >>> > phone: 507-786-3107 >>> > >>> > >>> > If nature does not answer first what we want, >>> > it is better to take what answer we get. >>> > >>> > -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 >>> > >>> ------------------------------------------------------------------------------ >>> > Lotusphere 2011 >>> > Register now for Lotusphere 2011 and learn how >>> > to connect the dots, take your collaborative environment >>> > to the next level, and enter the era of Social Business. >>> > >>> http://p.sf.net/sfu/lotusphere-d2d_______________________________________________ >>> > Jmol-users mailing list >>> > [email protected] >>> > https://lists.sourceforge.net/lists/listinfo/jmol-users >>> >>> >>> >>> ------------------------------------------------------------------------------ >>> Gaining the trust of online customers is vital for the success of any >>> company >>> that requires sensitive data to be transmitted over the Web. Learn how >>> to >>> best implement a security strategy that keeps consumers' information >>> secure >>> and instills the confidence they need to proceed with transactions. >>> http://p.sf.net/sfu/oracle-sfdevnl >>> _______________________________________________ >>> Jmol-users mailing list >>> [email protected] >>> https://lists.sourceforge.net/lists/listinfo/jmol-users >>> >> >> >> >> -- >> Robert M. Hanson >> Professor of Chemistry >> St. Olaf College >> 1520 St. Olaf Ave. >> Northfield, MN 55057 >> http://www.stolaf.edu/people/hansonr >> phone: 507-786-3107 >> >> >> If nature does not answer first what we want, >> it is better to take what answer we get. >> >> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 >> > > > > -- > Robert M. Hanson > Professor of Chemistry > St. Olaf College > 1520 St. Olaf Ave. > Northfield, MN 55057 > http://www.stolaf.edu/people/hansonr > phone: 507-786-3107 > > > If nature does not answer first what we want, > it is better to take what answer we get. > > -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 > -- Robert M. Hanson Professor of Chemistry St. Olaf College 1520 St. Olaf Ave. Northfield, MN 55057 http://www.stolaf.edu/people/hansonr phone: 507-786-3107 If nature does not answer first what we want, it is better to take what answer we get. -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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