I just have one little doubt about this... can't the isosurfaces be
displayed/hidden?
I calculate both solvent accessible surface and solvent excluded surface of
the protein. One of the display options is "cartoon+solvent excluded
surface", for example; doing "display displayed, 1.1" and "hide hidden, 1.1"
I see how it does not affect the solvent excluded surface. On the other
hand, if I do "display displayed, 1.1; isosurface on" and "hide hidden, 1.1;
isosurface off", the solvent excluded surface disappears correctly, but then
both surfaces (the solvent excluded and the solvent accessible ones)
appear...
Thanks again
2011/7/27 Daniel Carbajo <[email protected]>
> Oooooh, yes obviuosly "display displayed, 1.1" and "hide hidden, 1.1" does
> exactly what I wanted... I have a tendency to always think about the most
> difficult solution, so sorry for the silly question and thanks a lot for the
> fast and useful responses!
> Daniel
>
> El 27 de julio de 2011 12:11, Angel Herráez <[email protected]>escribió:
>
> Hello, Daniel
>>
>> First of all, Jmol has "save state" and "restore state" which will most
>> likely do what you need.
>> Check the documentation for details.
>>
>> Second, your description of the problem makes me think that the result you
>> see depends on
>> what your page controls are doing to **hide** the protein.
>> Best --and easier than the former-- is to use the "display" and "hide"
>> commands, and not
>> maybe "restrict" or "cartoon off". The former are easily reversible.
>> So if your checkbox executes "display displayed,protein" or even "display
>> all", and "hide
>> hidden,protein" or even "hide all", the state is preserved.
>> Otherwise, add "save state" and "restore state" commands to your actions
>> and the state will
>> be kept and retrieved from memory.
>>
>> Good luck and let us know the outcome.
>>
>>
>>
>> ------------------------------------------------------------------------------
>> Got Input? Slashdot Needs You.
>> Take our quick survey online. Come on, we don't ask for help often.
>> Plus, you'll get a chance to win $100 to spend on ThinkGeek.
>> http://p.sf.net/sfu/slashdot-survey
>> _______________________________________________
>> Jmol-users mailing list
>> [email protected]
>> https://lists.sourceforge.net/lists/listinfo/jmol-users
>>
>
>
------------------------------------------------------------------------------
Got Input? Slashdot Needs You.
Take our quick survey online. Come on, we don't ask for help often.
Plus, you'll get a chance to win $100 to spend on ThinkGeek.
http://p.sf.net/sfu/slashdot-survey
_______________________________________________
Jmol-users mailing list
[email protected]
https://lists.sourceforge.net/lists/listinfo/jmol-users
