Hello Sara I think that what you see may be PDB files that have alternate conformations for a few atoms. You can choose which one to display either from the menu or with a script. You will notice too in the atom IDs when you hover over them (I think it's a percent sign + a number or letter, but I'm telling from memory)
See http://chemapps.stolaf.edu/jmol/docs/#atomproperties and look for "altloc" By the way, 12.0.6 is not "current version" :) ------------------------------------------------------------------------------ BlackBerry® DevCon Americas, Oct. 18-20, San Francisco, CA The must-attend event for mobile developers. Connect with experts. Get tools for creating Super Apps. See the latest technologies. Sessions, hands-on labs, demos & much more. Register early & save! http://p.sf.net/sfu/rim-blackberry-1 _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
