Hi Osvaldo,
Currently, we have several coloring schemes for proteins in the ChemDoodle Web
Components, but b-factor values are not supported. We are working to have this
added as well as other coloring schemes. Feel free to let us know which
features you would like added, we will try to get to all of them.
You may also want to implement this functionality to the source yourself by
adding to the PDBInterpreter and Residue classes.
Bests,
Kevin
On Jun 4, 2012, at 12:26 AM, Osvaldo Martin wrote:
> Hi,
>
> I would like to make this web-page http://cheshift.com/example/example.html
> available to people with mobile devices or that do not have java installed.
> The protein is coloured according to some values stored in the b-factor
> column. I have download the new unstable version of Jmol, that integrates
> chemdoodle web component. It seems to work ok, except that when using the
> chemdoodle I don´t know how to color the protein using the b-factor values.
> Is this feature available when using chemdoodle? if not, there is another way
> to get the same result? like passing the values as arguments of some function?
>
>
> Thanks in advance.
>
> Osvaldo.
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