I have encountered a problem with displaying p orbital cartoons with
matching colors on all atoms of SO2 molecule.
select all
lcaoCartoon create "pz"
creates one p orbital with opposite color lobes to the other two.
I can individually add p lobes to all three atoms (and adjust the "phase"):
select atomno=1
lcaoCartoon create "pz"
select atomno=2
lcaoCartoon create "-pz"
select atomno=3
lcaoCartoon create "pz
but I do not know if the "phase color" problem is a bug (Jmol 12.3.32
6/23/2012), or is there some design reason for this behavior.
Any suggestions?
PM
------------------------------------------------------------------------------
Live Security Virtual Conference
Exclusive live event will cover all the ways today's security and
threat landscape has changed and how IT managers can respond. Discussions
will include endpoint security, mobile security and the latest in malware
threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/
_______________________________________________
Jmol-users mailing list
Jmol-users@lists.sourceforge.net
https://lists.sourceforge.net/lists/listinfo/jmol-users
