On 08/30/2012 03:56 PM, Sridhar Neelamraju wrote: > Dear jmol-users, > I am working with a set of .xyz files. Was wondering if there is a way to > select atoms based on the x,y and z-coordinates only. Something like > > select zcoordinate > 0.0 ; > select zcoordinate < 5.0 > > This way, I could select a set of slabs or cut a sphere within the system. > Yes, you can do it like this: select atomZ > 0.0 and atomZ < 5.0
Look at the Jmool scripting documentation (http://www.imb-jena.de/ImgLibPDB/Jena3D/doc/jmol_scripting/index.htm#atomexpressions) for advanced selection options. Regards, Rolf -- Rolf Huehne Postdoc Leibniz Institute for Age Research - Fritz Lipmann Institute (FLI) Beutenbergstrasse 11 07745 Jena, Germany Phone: +49 3641 65 6205 Fax: +49 3641 65 6210 E-Mail: rhue...@fli-leibniz.de Website: http://www.fli-leibniz.de Scientific Director: Prof. Dr. K. Lenhard Rudolph Head of Administration: Dr. Daniele Barthel Chairman of Board of Trustees: Dennys Klein VAT No: DE 153 925 464 Register of Associations: No. 296, Amtsgericht Jena Tax Number: 162/141/08228 ------------------------------------------------------------------------------ Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ _______________________________________________ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
