Bob,
Some naiveté on my part here: I had to use my specific object jmolApplet0. I do
not know how to translate the object Viewer to JavaScript. Also, I don't
understand the final Escape.escape(bs). I'll avoid explicitly stating the
obvious laugh line on this latter point. Jmol returns the first line as the
file name. I simply used the string "string," which I think Jmol returns for an
edited model. Finally, Jmol seems to have a condensed date following the final
Jmol version in the third line. Since I do not see this in you email code, I
did not include this.
Having said this, I think I got the date formatting correct. Here's the
JavaScript (encased in function for my testing ease):
function test() {
var mol = "string";
var version = Jmol.getPropertyAsArray(jmolApplet0,
"appletInfo.version")
var c = new Date();
mol += "\n__Jmol-" + version.substring(0,2);
mol += String("_0" + (1 + c.getMonth())).slice(-3);
mol += String("0" + (c.getDate())).slice(-2);
mol += String(c.getFullYear()).substring(2,4);
mol += String("0" + (c.getHours())).slice(-2);
mol += String("0" + (c.getMinutes())).slice(-2);
mol += "3D 1 1.00000 0.00000 0";
mol += "\nJmol version " + version + " EXTRACT: ";
alert(mol);
}
--
Otis Rothenberger
o...@chemagic.com
http://chemagic.com
On Jan 12, 2013, at 8:54 AM, Otis Rothenberger wrote:
> Bob,
>
> I get the basic flow of what's happening below, so I'll try. My JavaScript is
> pretty primitive and chaotic, so you'll have considerable clean up to do!
>
> Otis
>
> --
> Otis Rothenberger
> o...@chemagic.com
> http://chemagic.com
>
> On Jan 11, 2013, at 10:47 AM, Robert Hanson wrote:
>
>> That will take a bit of work. I seem to have missed that. What we are doing
>> there is setting up the MOL file date line. Maybe you can help me by writing
>> the JavaScript equivalent of this:
>>
>> StringXBuilder mol = new StringXBuilder();
>> String version = Viewer.getJmolVersion();
>> Calendar c = Calendar.getInstance();
>> mol.append("\n__Jmol-").append(version.substring(0, 2));
>> TextFormat.rFill(mol, "_00", "" + (1 + c.get(Calendar.MONTH)));
>> TextFormat.rFill(mol, "00", "" + c.get(Calendar.DAY_OF_MONTH));
>> mol.append(("" + c.get(Calendar.YEAR)).substring(2, 4));
>> TextFormat.rFill(mol, "00", "" + c.get(Calendar.HOUR_OF_DAY));
>> TextFormat.rFill(mol, "00", "" + c.get(Calendar.MINUTE));
>> mol.append("3D 1 1.00000 0.00000 0");
>> // This line has the format:
>> // IIPPPPPPPPMMDDYYHHmmddSSssssssssssEEEEEEEEEEEERRRRRR
>> // A2<--A8--><---A10-->A2I2<--F10.5-><---F12.5--><-I6->
>> mol.append("\nJmol version ").append(Viewer.getJmolVersion()).append(
>> " EXTRACT: ").append(Escape.escape(bs)).append("\n");
>>
>>
>> Bob
>>
>>
>> On Thu, Jan 10, 2013 at 12:58 PM, Otis Rothenberger <osrot...@chemagic.com>
>> wrote:
>> Bob,
>>
>> With JSmol, I'm getting an error message that I don't understand. I'm
>> getting the same message in different contexts:
>>
>> TypeError: 'undefined' is not an object (evaluating
>> 'java.util.Calendar.getInstance') 58490
>> http://chemagic.com/JSmol/j2s/core/core.z.js
>>
>> Most recently, I get this with:
>>
>> set picking ON;set atomPicking ON;set picking assignAtom_C
>>
>> I do NOT get this error if I put it into your Test2 page. In my own page, I
>> get the error on my first click. After that all seems OK.
>>
>> In the past, I got this same error when I tried to use getPropertyAsString
>> to extract the molfile. In this case, I cannot get the extracted molfile.
>>
>> Does anything obvious come to mind on this error message?
>>
>> I should mention that I am currently using pre model kit mode pick callback
>> code to replace atoms until I find the nature of this problem.
>>
>> Otis
>>
>> --
>> Otis Rothenberger
>> o...@chemagic.com
>> http://chemagic.com
>>
>>
>>
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