Thanks Maciek,
That worked a treat!
Glen
On 09/01/14 12:01, Maciek Wójcikowski wrote:
> Hi Glen,
>
> Have you tried double within function? I use following command to
> display residues within 10A from any ligand:
>
> display within(groups,within(10,TRUE,*/2))
>
> Note: receptor is model #1 and multiple ligands are in model 2 as
> frames. Change "*/2" to your ligand selection.
>
> ----
> Pozdrawiam, | Best regards,
> Maciek Wójcikowski
> mac...@wojcikowski.pl <mailto:mac...@wojcikowski.pl>
>
>
> 2014/1/9 Glen van Ginkel <g...@ebi.ac.uk <mailto:g...@ebi.ac.uk>>
>
> Hi all,
>
> After loading a PDB file I'm trying to restrict the view to the
> environment (surrounding residues) of a specific ligand. I'm able to
> select atoms within a given distance, but for amino acids that are
> truncated due to the distance cut-off I'd like to show the whole
> residue. Put another way, I want to display complete residues (Nucleic
> or Protein monomers, interacting heterogens and co-factors) within a
> given distance of a ligand.
>
> I've looked through much documentation and many website but I
> can't seem
> to find the necessary commands to do this.
>
>
> If any of you have suggestions I'd be most eager to hear from you.
>
> Kind regards,
>
> Glen
>
>
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