Thanks, Otis.

Yes, the page has the var declaration in <head>.

It seems the applet loads and all the other aspects of the page work
properly.  The error occurs when trying script containing
jmol.getpropertyasarray.  I tried w/ and w/o declaration in <head>, but it
did not make a difference.

Matt

On 1/16/14 9:18 AM, "Otis Rothenberger" <osrot...@chemagic.com> wrote:



Matt,


There was some list discussion of this a while back, and I'm still not
sure what was recommended at the time. The discussion related to the use
of the following in the <head> JavaScript prior to the <body> declaration:


var jmolApplet0;




I think the statement was made that this was no longer needed. I had some
problems leaving it out, so I just continued to include it in my pages. If
I have 10 JSmol objects in the body, I do 10 instantiations in the head.


Otis

--
Otis Rothenberger
o...@chemagic.com
http://chemagic.com





On Jan 16, 2014, at 9:00 AM, Kubasik, Matt <mkuba...@fairfield.edu> wrote:


Bob,

The previous problem persists.  When I request the page to show a
drop-down menu of frames/frame names,  Chrome's javascript console still
offers:

Uncaught ReferenceError:  JmolApplet0 is not defined.

Initializing jsmol is new to me.  Maybe I'm doing it wrong.   I have var
Info defined in the page's <head> tag and in <body> I have:

jmolApplet0 = Jmol.getApplet("jmolApplet0", Info)

Matt Kubasik

From: Robert Hanson <hans...@stolaf.edu<mailto:hans...@stolaf.edu>>
Reply-To: 
"jmol-users@lists.sourceforge.net<mailto:jmol-users@lists.sourceforge.net>"
 <jmol-users@lists.sourceforge.net<mailto:jmol-users@lists.sourceforge.net>
>
Date: Thursday, January 16, 2014 2:22 AM
To: 
"jmol-users@lists.sourceforge.net<mailto:jmol-users@lists.sourceforge.net>"
 <jmol-users@lists.sourceforge.net<mailto:jmol-users@lists.sourceforge.net>
>
Subject: Re: [Jmol-users] vibrate.htm for Gaussian output?

We identified a problem with jmolGetPropertyAsArray today, and that may be
the problem. Please try the version at

http://chemapps.stolaf.edu/jmol/zip/jmol-14.1.6_2014.01.15.zip

___JmolVersion="14.1.6_dev_2014.01.15"

bug fix: GETPROPERTY command and function can return SV.toString() rather
than property escaped value
bug fix: Jmol.getPropertyAsArray for certain arrays returns string
"[object Array]"

If that doesn't solve the problem, let me know.

Bob


On Wed, Jan 15, 2014 at 6:34 PM, Kubasik, Matt
<mkuba...@fairfield.edu<mailto:mkuba...@fairfield.edu>> wrote:
Dear Bob and List,

I've been trying to adapt Bob's vibrate.htm document to

1.  read local Gaussian files (containing normal mode info) ;
2.  Provide a drop-down menu of the normal modes.

Non-working page is found here:
www.neon22.com/jsmol/jsmol/jsmolvib700_e.htm
<http://www.neon22.com/jsmol/jsmol/jsmolvib700_e.htm><http://www.neon22.com
/jsmol/jsmol/jsmolvib700_e.htm>

I think my problem is with the syntax of  jmol.getpropertyasarray.

Using

var InfoM = 
Jmol.GetPropertyAsArray(JmolApplet0,"modelinfo.models.name<http://modelinfo
.models.name <http://modelinfo.models.name/>>")

Gives the following int the javascript console:

Uncaught ReferenceError: JmolApplet0 is not defined

Any ideas?

Matt

PS A more direct adaptation for Gaussian files for vibrate.htm is here:
http://www.neon22.com/jsmol/jsmol/vibrateMKd_6.htm
This version produces a drop down list as with Bob's original vibrate.htm.
But for this version, the "read" button does not function. Hints for
fixing either attempt would be appreciated.

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--
Robert M. Hanson
Larson-Anderson Professor of Chemistry
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr


If nature does not answer first what we want,
it is better to take what answer we get.

-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900


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