On 10/21/2014 06:08 PM, go wrote:
>> Where would that data be saved? and compatible with
>> any operating system?
>
> My suggestion applies only to the standalone Jmol program.
> In this case the history file can naturally live in Jmol's
> install directory, where the Jmol.jar file already resides.
> (For the Java applet I don't have a suggestion.
>    Here even the notion of previous session is unclear.)
>
It is not that simple.
The current user might not have the right to write in the install directory.
What about multiple users on the same computer?

>> How to control how much disk space will be available for that storage?
>> How to clear it?
>
> Regarding the size of the history file, it must be limited.
> A few thousand lines would suffice as a default,
> but the maximum number of lines should be a user-defined parameter.
> What happens when the maximum number of lines are exceeded?
> Naturally the first and oldest ones are lost gradually.
>
> A more important decision to make:
> - When should we append to the history file?
> After execution of each line, after execution of n lines,
> at regular time intervals, at the end of the session, etc.?
> I think that after each line should be a good first choice,
> and then we should just gain experience and see how it goes.
>
One set of problems here will be caused by multiple instances of Jmol 
run simultaneously by the same user on the same computer.
If you write one line at a time you will get a mixture of different 
sessions that will not be very helpful. You must also make sure that the 
instances are writing one after another.

And what about command-line usage?
We use Jmol.jar for example for producing automatically about 300000 
images for all PDB structure by a complex script with about hundred 
lines of code. I wouldn't want that to be slowed down by writing into a 
history file for each line (and coordinating to do this from 30 
processes in parallel).

Regards,
Rolf
-- 

Rolf Huehne
Postdoc

Leibniz Institute for Age Research - Fritz Lipmann Institute (FLI)
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