PS: I can’t decide whether this is a bug or a feature. > Begin forwarded message: > > From: Philip Bays <[email protected]> > Subject: jmol/jmse issue > Date: August 19, 2015 at 11:06:29 AM EDT > To: Jmol Jmol <[email protected]> > > I have played with this. At first I thought it had do with symmetry, but > now I think it is the presence of an aromatic ring. For example, if you load > toluene in the dismal applet, then rotate it to look down the methyl-ring > bond, send it to jsme and then return it to jmol, it will rotate the > structure (or re-download it) so that the ring is face-on. I do not see the > issue in molecules without an aromatic ring, even substituted cyclohexane > seem to retain the new orientation in jmol. > > Phil > > Philip Bays > Emeritus Professor of Chemistry > Saint Mary's College > Notre Dame, IN 46556 > [email protected] > >
Philip Bays Emeritus Professor of Chemistry Saint Mary's College Notre Dame, IN 46556 [email protected]
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