On 10/07/2015 04:45 PM, Feng, Shihai wrote: > Robert, > > Thanks. But the "display symop=1” clears out everything and leaves the window > blank. Still doesn’t solve the problems. I run the "load=2B4C" after > "display symop=1” it brings up the trimmer again. > > The issue is that I would like to display only the monomer in the pdb file > after display trimmer with ""load=2B4C filter"biomolecule 1” “. > > Any commend I can use? > Shihai, it seems that your definition of 'monomer' differs from the common definition.
As you can see in the Sequence/Alignment section of the JenaLib atlas page (http://jenalib.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=2b4c) for PDB entry 2B4C all four chains have a different amino acid sequence. So all proteins of the protein complex mentioned in the title of the structure are monomeric here. I guess what you want is to display only one or more specific chains of the protein complex consisting of the chains C,G,H,L. You can do this for example like this: display :C; display :C,:G; To show all chains again you can use the command 'display all;'. Regards, Rolf -- Rolf Huehne Postdoc Leibniz Institute for Age Research - Fritz Lipmann Institute (FLI) Beutenbergstrasse 11 07745 Jena, Germany Phone: +49 3641 65 6205 Fax: +49 3641 65 6210 E-Mail: rhue...@fli-leibniz.de Website: http://www.fli-leibniz.de Scientific Director: Prof. Dr. K. Lenhard Rudolph Head of Administration: Dr. Daniele Barthel Chairman of Board of Trustees: Dennys Klein VAT No: DE 153 925 464 Register of Associations: No. 230296, Amtsgericht Jena Tax Number: 162/141/08228 ------------------------------------------------------------------------------ Full-scale, agent-less Infrastructure Monitoring from a single dashboard Integrate with 40+ ManageEngine ITSM Solutions for complete visibility Physical-Virtual-Cloud Infrastructure monitoring from one console Real user monitoring with APM Insights and performance trend reports Learn More http://pubads.g.doubleclick.net/gampad/clk?id=247754911&iu=/4140 _______________________________________________ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
