Your site.
--
Otis Rothenberger
o...@chemagic.org
http://chemagic.org
> On Apr 20, 2016, at 11:29 AM, Robert Hanson <hans...@stolaf.edu> wrote:
>
> Otis, that is at my site or locally?
>
>> On Wed, Apr 20, 2016 at 8:27 AM, Otis Rothenberger <osrot...@icloud.com>
>> wrote:
>> I see the same behavior as Phil, but I see two other things in Safari,
>> probably because I have developer tools turned on:
>>
>> 1) Load Pop-up
>>
>> JSmolCore.js: synchronous binary file transfer is requested but not available
>>
>> 2) JS Console
>>
>> XMLHttpRequest.responseType cannot be changed for synchronous HTTP(S)
>> requests made from the window context.
>>
>> Otis
>> --
>> Otis Rothenberger
>> o...@chemagic.org
>> http://chemagic.org
>>
>>> On Apr 20, 2016, at 9:01 AM, Philip Bays <pb...@saintmarys.edu> wrote:
>>>
>>> Mac Safari does not like the mufti.htm file load from your site.
>>> Unrecognized format for 1crn. Chrome and Firefox work fine.
>>>
>>>
>>>> On Apr 20, 2016, at 2:07 AM, Robert Hanson <hans...@stolaf.edu> wrote:
>>>>
>>>> see http://chemapps.stolaf.edu/jmol/jsmol/mmtf.htm and
>>>> http://chemapps.stolaf.edu/jmol/zip/jmol-14.5.4_2016.04.19.zip
>>>>
>>>> needs testing; highly experimental.
>>>>
>>>> Bob
>>>>
>>>>
>>>> Jmol.___JmolVersion="14.5.4_2016.04.19"
>>>>
>>>> FEATURE NOTE: DSSP calculation at http://www.cmbi.ru.nl/dssp.html as
>>>> changed
>>>> from the original version, now emphasizing pi-helices
>>>> (type "helix-5")
>>>> insteda of alpha. The pi-helix set is determined first,
>>>> then alpha helices
>>>> (helix-4), then 3-10 helices (helix-3). I am not changing
>>>> the order of
>>>> determination in Jmol because I think this is a bug in
>>>> that algorithm.
>>>>
>>>> new feature: preliminary MMTF reader
>>>> -- MacroMolecular Transmission Format (MMTF, from RTSB)
>>>> -- see https://github.com/rcsb/mmtf/blob/master/spec.md#overview
>>>> -- binary format for file transfer and molecule construction
>>>> -- uses MessagePack binary JSON format
>>>> -- entirely experimental; not for general consumption
>>>> -- biomolecule processing works
>>>> -- DSSP secondary structure is read
>>>> -- use LOAD =xxxx.mmtf for quick loading
>>>>
>>>> *
>>>> * JmolData RCSB MMTF (macromolecular transmission format) file reader
>>>> *
>>>> * see https://github.com/rcsb/mmtf/blob/master/spec.md
>>>> *
>>>> * /full/ specification as of 2016.4.18 is implemented,including:
>>>> *
>>>> * reading atoms, bonds, and DSSR secondary structure
>>>> *
>>>> * load =1f88.mmtf
>>>> *
>>>> *
>>>> * reading space groups and unit cells, and using those as per other
>>>> readers
>>>> *
>>>> * load =1crn.mmtf {1 1 1}
>>>> *
>>>> * reading bioassemblies (biomolecules) and applying those transformations
>>>> *
>>>> * load =1auy.mmtf FILTER "biomolecule 1;*.CA,*.P"
>>>> *
>>>> * reading biomolecules and lattices, and loading course-grained
>>>> *
>>>> * load =1auy.mmtf {2 2 1} filter "biomolecule 1;bychain";spacefill
>>>> 30.0; color property symop
>>>> *
>>>> *
>>>>
>>>> bug fix: certain viral capsid CIF files will fail to load due to this
>>>> line: XAU '(X0)(1-10,21-25)' A,B,C
>>>>
>>>>
>>>>
>>>>
>>>> --
>>>> Robert M. Hanson
>>>> Larson-Anderson Professor of Chemistry
>>>> Chair, Department of Chemistry
>>>> St. Olaf College
>>>> Northfield, MN
>>>> http://www.stolaf.edu/people/hansonr
>>>>
>>>>
>>>> If nature does not answer first what we want,
>>>> it is better to take what answer we get.
>>>>
>>>> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>>>>
>>>> ------------------------------------------------------------------------------
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>>>> Jmol-users mailing list
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>>>
>>> Philip Bays
>>> Emeritus Professor of Chemistry
>>> Saint Mary's College
>>> Notre Dame, IN 46556
>>> pb...@saintmarys.edu
>>>
>>>
>>> ------------------------------------------------------------------------------
>>> Find and fix application performance issues faster with Applications Manager
>>> Applications Manager provides deep performance insights into multiple tiers
>>> of
>>> your business applications. It resolves application problems quickly and
>>> reduces your MTTR. Get your free trial!
>>> https://ad.doubleclick.net/ddm/clk/302982198;130105516;z_______________________________________________
>>> Jmol-users mailing list
>>> Jmol-users@lists.sourceforge.net
>>> https://lists.sourceforge.net/lists/listinfo/jmol-users
>>
>>
>> ------------------------------------------------------------------------------
>> Find and fix application performance issues faster with Applications Manager
>> Applications Manager provides deep performance insights into multiple tiers
>> of
>> your business applications. It resolves application problems quickly and
>> reduces your MTTR. Get your free trial!
>> https://ad.doubleclick.net/ddm/clk/302982198;130105516;z
>> _______________________________________________
>> Jmol-users mailing list
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>>
>
>
>
> --
> Robert M. Hanson
> Larson-Anderson Professor of Chemistry
> Chair, Department of Chemistry
> St. Olaf College
> Northfield, MN
> http://www.stolaf.edu/people/hansonr
>
>
> If nature does not answer first what we want,
> it is better to take what answer we get.
>
> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>
> ------------------------------------------------------------------------------
> Find and fix application performance issues faster with Applications Manager
> Applications Manager provides deep performance insights into multiple tiers of
> your business applications. It resolves application problems quickly and
> reduces your MTTR. Get your free trial!
> https://ad.doubleclick.net/ddm/clk/302982198;130105516;z
> _______________________________________________
> Jmol-users mailing list
> Jmol-users@lists.sourceforge.net
> https://lists.sourceforge.net/lists/listinfo/jmol-users
------------------------------------------------------------------------------
Find and fix application performance issues faster with Applications Manager
Applications Manager provides deep performance insights into multiple tiers of
your business applications. It resolves application problems quickly and
reduces your MTTR. Get your free trial!
https://ad.doubleclick.net/ddm/clk/302982198;130105516;z
_______________________________________________
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