https://sourceforge.net/projects/jmol/files/Jmol/Version%2014.6/Version%2014.6.2/
Note in relation to http to https conversion: Jmol now accesses more sites
using HTTPS, including PDB and CIF files from RCSB, and all files from EBI.
chemapps.stolaf.edu must now be accessed as https://. While jQuery does not
automatically switch to https, all AJAX done from JSmol will be
auto-switched to https: calls rather than http: if the page is using the
https:// protocol. This is required because AJAX from https:// to http://
is not allowed. The newly released JSmol.min.js takes care of this.
new feature: allowance for external app loading of binary (mmtf) files
or any other file using a simple interface:
Viewer.openReader(fullPathName, null, reader)
feature change: updated links to EBI electron density maps (formerly
Uppsala; for isosurface "*xxxx")
"pdbemap", "https://www.ebi.ac.uk/pdbe/coordinates/files/%file.ccp4";,
"pdbemapdiff", "
https://www.ebi.ac.uk/pdbe/coordinates/files/%file_diff.ccp4";
bug fix: Spartan 16 reader may have empty first model
bug fix: 2D model and "show SMILES" uses @SP -- should be /nostereo/ based
on _.dimension == "2D"
bug fix: NCI/CADD now requires "get3d=true" not "get3d=True" for some
models.
code: Unit test includes binary types PyMOL and MMTF
code: recoding in javajs.util.Measure.calculateQuaternionRotation (Andrew
Hanson)
--
Robert M. Hanson
Larson-Anderson Professor of Chemistry
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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