Hi Jeremy,

This sounded promising, as at some point I did have IPython installed so I
could use Jacob Quinn's Sublime-IJulia package. It is possible that
something was left behind. However, unfortunately I haven't been able to
find anything that looks suspicious (I'm on Ubuntu 14.04). For those who
are interested, I was only able to locate the following files on my OS:

sudo find /home/colin -name "*ipython*" -print
/home/colin/.local/share/Trash/files/v0.3_OLD/IJulia/deps/ipython.jl
/home/colin/.julia/v0.3/IJulia/deps/ipython.jl

and

sudo find /usr -name "*ipython*" -print
/usr/share/app-install/icons/ipython.svg
/usr/share/app-install/icons/ipython3.svg
/usr/share/app-install/desktop/ipython3:ipython3.desktop
/usr/share/app-install/desktop/ipython:ipython.desktop
/usr/share/app-install/desktop/ipython-qtconsole:ipython-qtconsole.desktop
/usr/share/app-install/desktop/ipython3-qtconsole:ipython3-qtconsole.desktop
/usr/lib/calibre/calibre/utils/ipython.py

Searches for "*Jupyter*" did not turn up anything.

Cheers and thanks again for responding.

Colin



On 31 October 2015 at 21:29, Jeremy Cavanagh <jeremy.cavan...@orange.fr>
wrote:

> Hi Colin,
>
> I was having the same problems while trying to get julia to work in atom
> and was hoping that this thread would provide a solution. However, I was
> alao trying to get the hydrogen to work as well but kept getting an error
> which I could not figure out the cause so posted to an issue:
>
> https://github.com/willwhitney/hydrogen/issues/127#issuecomment-152661805
>
> After following this great advice not only does hydrogen run without
> errors, but, the deprecation warnings that you and I were getting also
> disappeared. I am assuming that you are working on OS X.
>
> Hope this helps.
>
>
> On Wednesday, October 28, 2015 at 12:57:43 AM UTC+1, colint...@gmail.com
> wrote:
>>
>> Hi all,
>>
>> I'm using Julia v0.4 with the Atom package, on Atom 1.0 with the packages
>> ink, julia-client, and language-julia (and I'm really enjoying this as an
>> IDE solution).
>>
>> I can toggle the Julia console in Atom, and enter code directly into it
>> without any errors or warnings. However, as soon as I try to evaluate a
>> line of code from the Atom editor, I get a large number of deprecation
>> warnings, either of the form:
>>
>> WARNING: Base.Uint8 is deprecated, use UInt8 instead.
>>   likely near no file:422
>>
>> or
>>
>> WARNING: Base.Uint8 is deprecated, use UInt8 instead.
>>   likely near no file:422
>> in skip at /home/colin/.julia/v0.4/LNR/src/LNR.jl:171
>>
>> Has anyone else encountered this and is there a fix? I had a look through
>> the LNR source, and there is nothing in it that should be triggering a
>> deprecation warning, nor is there even a line 171 (it only goes up to about
>> line 130).
>>
>> Note, I can just ignore the deprecation warnings, and continue on working
>> without a problem, so this isn't an urgent issue. Just wondering if I've
>> stuffed up the install process somehow.
>>
>> Cheers,
>>
>> Colin
>>
>

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