Scrap that - not sure why I thought it was in 5.4.0.39.

I followed the guidance at x and installed 5.4.0-40-generic

Works perfectly for me.

Like @bulkadhesive I don't have the Starship (aka Threadripper) device.

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https://bugs.launchpad.net/bugs/1865988

Title:
  Performing function level reset of AMD onboard USB and audio devices
  causes system lockup

Status in linux package in Ubuntu:
  In Progress
Status in linux-oem-5.6 package in Ubuntu:
  Invalid
Status in linux-oem-osp1 package in Ubuntu:
  Invalid
Status in linux source package in Bionic:
  Fix Committed
Status in linux-oem-5.6 source package in Bionic:
  Invalid
Status in linux-oem-osp1 source package in Bionic:
  Fix Committed
Status in linux source package in Eoan:
  Fix Committed
Status in linux-oem-5.6 source package in Eoan:
  Invalid
Status in linux-oem-osp1 source package in Eoan:
  Invalid
Status in linux source package in Focal:
  Fix Committed
Status in linux-oem-5.6 source package in Focal:
  Fix Committed
Status in linux-oem-osp1 source package in Focal:
  Invalid
Status in linux source package in Groovy:
  In Progress
Status in linux-oem-5.6 source package in Groovy:
  Invalid
Status in linux-oem-osp1 source package in Groovy:
  Invalid

Bug description:
  [SRU Justifcation]

  [Impact]

  Devices affected:

  * [1022:148c] USB controller [0c03]: Advanced Micro Devices, Inc. [AMD] 
Starship
    USB 3.0 Host Controller
  * [1022:149c] USB controller [0c03]: Advanced Micro Devices, Inc. [AMD] 
Matisse
    USB 3.0 Host Controller
  * [1022:1487] Audio device [0403]: Advanced Micro Devices, Inc. [AMD]
    Starship/Matisse HD Audio Controller

  Despite advertising FLReset device capabilities, performing a function level
  reset of either of these devices causes the system to lock up. This is of
  particular issue where these devices appear in their own IOMMU groups and are
  well suited to VFIO passthrough.

  Issue was introduced in AMD's "AGESA Combo-AM4 1.0.0.4 Patch B" microcode
  update, and affects dozens of motherboard models across various vendors.

  Additional discussion of this issue:
  
https://www.reddit.com/r/VFIO/comments/eba5mh/workaround_patch_for_passing_through_usb_and/

  [Fix]

  Two commits currently landed in linux-pci pci/virutualization:
  * 0d14f06cd665 PCI: Avoid FLR for AMD Matisse HD Audio & USB 3.0
  * 5727043c73fd PCI: Avoid FLR for AMD Starship USB 3.0

  [Test Case]

  Peform the test on an impacted system:

  * B350, B450, X370, X470, X570 motherboards (practically anything with an AM4
    socket);
  * Ryzen 3000-series CPU (2000-series possibly also affected);
  * BIOS/UEFI firmware that includes "AGESA Combo-AM4 1.0.0.4 Patch B" (check
    vendor release notes)

  In the above case where '0000:10:00.3' is the USB controller '1022:149c', 
issue
  a reset command:

    $ echo 1 | sudo tee /sys/bus/pci/devices/0000\:10\:00.3/reset

  Impacted systems will not return successfully and become unstable, requiring a
  reboot. `/var/logs/syslog` will show something resembling the following:

    xhci_hcd 0000:10:00.3: not ready 1023ms after FLR; waiting
    xhci_hcd 0000:10:00.3: not ready 2047ms after FLR; waiting
    xhci_hcd 0000:10:00.3: not ready 4095ms after FLR; waiting
    xhci_hcd 0000:10:00.3: not ready 8191ms after FLR; waiting
    xhci_hcd 0000:10:00.3: not ready 16383ms after FLR; waiting
    xhci_hcd 0000:10:00.3: not ready 32767ms after FLR; waiting
    xhci_hcd 0000:10:00.3: not ready 65535ms after FLR; giving up
    clocksource: timekeeping watchdog on CPU14: Marking clocksource 'tsc' as 
unstable because the skew is too large:
    clocksource: 'hpet' wd_now: f63fcfe wd_last: d468894 mask: ffffffff
    clocksource: 'tsc' cs_now: 60e67e17758 cs_last: 60d2a81ce24 mask: 
ffffffffffffffff
    tsc: Marking TSC unstable due to clocksource watchdog
    TSC found unstable after boot, most likely due to broken BIOS. Use 
'tsc=unstable'.
    sched_clock: Marking unstable (1817664630139, 314261908)<-(1817981099530, 
-2209419)

  [Regression Risk]
  Low. These two patches affect only systems with a device needs fix.

  ========== Original Bug Description ==========

  $ lsb_release -rd
  Description:    Ubuntu 19.10
  Release:        19.10

  [Impact]

  Devices affected:

  * [1022:149c] USB controller [0c03]: Advanced Micro Devices, Inc. [AMD] 
Matisse USB 3.0 Host Controller
  * [1022:1487] Audio device [0403]: Advanced Micro Devices, Inc. [AMD] 
Starship/Matisse HD Audio Controller

  Despite advertising FLReset device capabilities, performing a function
  level reset of either of these devices causes the system to lock up.
  This is of particular issue where these devices appear in their own
  IOMMU groups and are well suited to VFIO passthrough.

  Issue was introduced in AMD's "AGESA Combo-AM4 1.0.0.4 Patch B"
  microcode update, and affects dozens of motherboard models across
  various vendors.

  Additional discussion of this issue:
  
https://www.reddit.com/r/VFIO/comments/eba5mh/workaround_patch_for_passing_through_usb_and/

  [Fix]

  Add a quirk to disable FLR on these devices.  Sample patch attached.

  [Test Case]

  Peform the test on an impacted system:

  * B350, B450, X370, X470, X570 motherboards (practically anything with an AM4 
socket);
  * Ryzen 3000-series CPU (2000-series possibly also affected);
  * BIOS/UEFI firmware that includes "AGESA Combo-AM4 1.0.0.4 Patch B" (check 
vendor release notes)

  In the above case where '0000:10:00.3' is the USB controller
  '1022:149c', issue a reset command

    $ echo 1 | sudo tee /sys/bus/pci/devices/0000\:10\:00.3/reset

  Impacted systems will not return successfully and become unstable,
  requiring a reboot.  `/var/logs/syslog` will show something resembling
  the following

    Mar  4 14:51:26 bunty kernel: [ 1745.043914] xhci_hcd 0000:10:00.3: not 
ready 1023ms after FLR; waiting
    Mar  4 14:51:28 bunty kernel: [ 1747.091910] xhci_hcd 0000:10:00.3: not 
ready 2047ms after FLR; waiting
    Mar  4 14:51:32 bunty kernel: [ 1750.163972] xhci_hcd 0000:10:00.3: not 
ready 4095ms after FLR; waiting
    Mar  4 14:51:37 bunty kernel: [ 1755.283933] xhci_hcd 0000:10:00.3: not 
ready 8191ms after FLR; waiting
    Mar  4 14:51:46 bunty kernel: [ 1764.499943] xhci_hcd 0000:10:00.3: not 
ready 16383ms after FLR; waiting
    Mar  4 14:52:04 bunty kernel: [ 1782.164126] xhci_hcd 0000:10:00.3: not 
ready 32767ms after FLR; waiting
    Mar  4 14:52:39 bunty kernel: [ 1816.979432] xhci_hcd 0000:10:00.3: not 
ready 65535ms after FLR; giving up
    Mar  4 14:52:39 bunty kernel: [ 1817.978790] clocksource: timekeeping 
watchdog on CPU14: Marking clocksource 'tsc' as unstable because the skew is 
too large:
    Mar  4 14:52:39 bunty kernel: [ 1817.978806] clocksource:                   
    'hpet' wd_now: f63fcfe wd_last: d468894 mask: ffffffff
    Mar  4 14:52:39 bunty kernel: [ 1817.978809] clocksource:                   
    'tsc' cs_now: 60e67e17758 cs_last: 60d2a81ce24 mask: ffffffffffffffff
    Mar  4 14:52:39 bunty kernel: [ 1817.978818] tsc: Marking TSC unstable due 
to clocksource watchdog
    Mar  4 14:52:40 bunty kernel: [ 1817.978892] TSC found unstable after boot, 
most likely due to broken BIOS. Use 'tsc=unstable'.
    Mar  4 14:52:40 bunty kernel: [ 1817.978894] sched_clock: Marking unstable 
(1817664630139, 314261908)<-(1817981099530, -2209419)

  [Regression Risk]

  Unknown
  ---
  ProblemType: Bug
  ApportVersion: 2.20.11-0ubuntu8.2
  Architecture: amd64
  AudioDevicesInUse: Error: command ['fuser', '-v', '/dev/snd/controlC0', 
'/dev/snd/hwC0D0', '/dev/snd/pcmC0D7p', '/dev/snd/pcmC0D3p', 
'/dev/snd/by-path', '/dev/snd/controlC1', '/dev/snd/hwC1D0', 
'/dev/snd/pcmC1D2c', '/dev/snd/pcmC1D1p', '/dev/snd/pcmC1D0c', 
'/dev/snd/pcmC1D0p', '/dev/snd/seq', '/dev/snd/timer'] failed with exit code 1:
  DistroRelease: Ubuntu 19.10
  MachineType: To Be Filled By O.E.M. To Be Filled By O.E.M.
  NonfreeKernelModules: zfs zunicode zavl icp zcommon znvpair nvidia_modeset 
nvidia
  Package: linux (not installed)
  ProcFB: 0 EFI VGA
  ProcKernelCmdLine: BOOT_IMAGE=/boot/vmlinuz-5.3.0-40+amdnoflr-generic 
root=UUID=f2f3748c-f017-47ae-aa38-943e5f5189e0 ro amd_iommu=on
  ProcVersionSignature: Ubuntu 5.3.0-40.32+amdnoflr-generic 5.3.18
  RelatedPackageVersions:
   linux-restricted-modules-5.3.0-40+amdnoflr-generic N/A
   linux-backports-modules-5.3.0-40+amdnoflr-generic  N/A
   linux-firmware                                     1.183.3
  Tags:  eoan
  Uname: Linux 5.3.0-40+amdnoflr-generic x86_64
  UnreportableReason: This report is about a package that is not installed.
  UpgradeStatus: No upgrade log present (probably fresh install)
  UserGroups: adm cdrom dip libvirt lpadmin lxd plugdev sambashare sudo
  _MarkForUpload: False
  dmi.bios.date: 11/14/2019
  dmi.bios.vendor: American Megatrends Inc.
  dmi.bios.version: L3.77
  dmi.board.name: X470 Taichi
  dmi.board.vendor: ASRock
  dmi.chassis.asset.tag: To Be Filled By O.E.M.
  dmi.chassis.type: 3
  dmi.chassis.vendor: To Be Filled By O.E.M.
  dmi.chassis.version: To Be Filled By O.E.M.
  dmi.modalias: 
dmi:bvnAmericanMegatrendsInc.:bvrL3.77:bd11/14/2019:svnToBeFilledByO.E.M.:pnToBeFilledByO.E.M.:pvrToBeFilledByO.E.M.:rvnASRock:rnX470Taichi:rvr:cvnToBeFilledByO.E.M.:ct3:cvrToBeFilledByO.E.M.:
  dmi.product.family: To Be Filled By O.E.M.
  dmi.product.name: To Be Filled By O.E.M.
  dmi.product.sku: To Be Filled By O.E.M.
  dmi.product.version: To Be Filled By O.E.M.
  dmi.sys.vendor: To Be Filled By O.E.M.

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