You can make those different leads into a single one. Or add an extra
site to each unit cell which has no hoppings to the next one, but a
hopping within the unit cell.

On Wed, 23 Sep 2020 at 20:21, Sergey Slizovskiy <[email protected]> wrote:
>
> Dear Anton,
> Thank you for your reply!  I am unsure how to add hoppings between
> different leads.  I am even surprised that this is possible to do.
>   Or, did you mean adding extra fake "thickness" to a lead?
> Best wishes,
> Sergey
>
> On 23/09/2020 18:05, Anton Akhmerov wrote:
> > Dear Sergey,
> >
> > That seems to be a bug in gauge that occurs when there are no hoppings
> > within the lead unit cell. As a workaround I recommend to add hoppings
> > connecting different 1D leads that have a magnitude of 0. I've opened
> > an issue to track that:
> > https://gitlab.kwant-project.org/kwant/kwant/-/issues/388
> >
> > Best,
> > Anton
> >
> > On Wed, 23 Sep 2020 at 17:44, Sergey Slizovskiy <[email protected]> wrote:
> >> Dear Christoph,
> >>     Here is the minimal example giving a error I described.   The system
> >> is a 3-layer graphene and I add a couple of vertical 1D chains with
> >> small hopping to the
> >> main sample to model the STS tip.
> >> Thank you,
> >> Sergey
> >>
> >>
> >> On 23/09/2020 15:52, Christoph Groth wrote:
> >>> Sergey Slizovskiy wrote:
> >>>
> >>>>     I am having a error with "gauge" when I am adding 1D leads (Chains)
> >>>> to my 3D system.  (I have both Chain leads, where I do not need gauge,
> >>>> of course,
> >>> Could you please provide a minimal self-contained script that allows to
> >>> reproduce the problem?
> >>>
> >>> Christoph
> >>>
> >>>

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