They share the same code, so building one w/o the other makes no sense.
---
 configure            |    1 +
 libavformat/Makefile |    3 ---
 2 files changed, 1 insertions(+), 3 deletions(-)

diff --git a/configure b/configure
index ca11a85..5d727aa 100755
--- a/configure
+++ b/configure
@@ -1640,6 +1640,7 @@ dirac_demuxer_select="dirac_parser"
 eac3_demuxer_select="ac3_parser"
 flac_demuxer_select="flac_parser"
 ipod_muxer_select="mov_muxer"
+ismv_muxer_select="mov_muxer"
 matroska_audio_muxer_select="matroska_muxer"
 matroska_demuxer_suggest="bzlib lzo zlib"
 mov_demuxer_suggest="zlib"
diff --git a/libavformat/Makefile b/libavformat/Makefile
index c589316..2bcf3b2 100644
--- a/libavformat/Makefile
+++ b/libavformat/Makefile
@@ -122,9 +122,6 @@ OBJS-$(CONFIG_IMAGE2PIPE_DEMUXER)        += img2dec.o img2.o
 OBJS-$(CONFIG_IMAGE2PIPE_MUXER)          += img2enc.o img2.o
 OBJS-$(CONFIG_INGENIENT_DEMUXER)         += ingenientdec.o rawdec.o
 OBJS-$(CONFIG_IPMOVIE_DEMUXER)           += ipmovie.o
-OBJS-$(CONFIG_ISMV_MUXER)                += movenc.o isom.o avc.o       \
-                                            movenchint.o rtpenc_chain.o \
-                                            mov_chan.o
 OBJS-$(CONFIG_ISS_DEMUXER)               += iss.o
 OBJS-$(CONFIG_IV8_DEMUXER)               += iv8.o
 OBJS-$(CONFIG_IVF_DEMUXER)               += ivfdec.o
-- 
1.7.1

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