Seems like switching to opt build has removed the linking errors. Thanks, Jim
On Thu, Jun 20, 2013 at 4:02 PM, Jim Fonseca <jefons...@gmail.com> wrote: > Just realized the "--whole archive" issue was probably due to a problem > loading gnu compiler and cray compiler being used instead... > Thanks, > Jim > > > > On Thu, Jun 20, 2013 at 3:37 PM, Jim Fonseca <jefons...@gmail.com> wrote: > >> Hi John, >> On the local cluster (RCAC-Carter) we use intel/13.0.1.117 compilers >> On Blue Waters, I am using gcc (SUSE Linux) 4.3.4 [gcc-4_3-branch >> revision 152973]. >> >> I've attached our Makefile for PETSc 3.4 on Blue Waters and the config >> log for that. Let me know if I can provide something else. >> >> I should also say that I have been able to build PETSc 3.4 and libmesh >> master (from May 15th) on my Mac (i686-apple-darwin11-llvm-gcc-4.2 (GCC) >> 4.2.1). >> >> I tried removing the --with-methods option so that libmesh would try all >> three (gdb opt devel) but I got this error >> make[4]: Entering directory >> `/mnt/a/u/sciteam/jfonseca/NEMO5_PETSc_34_dynamic_MAGMA/libs/libmesh/libmesh/contrib/netcdf/ >> 4.2.1.1/liblib' >> CCLD libnetcdf.la >> CC-2115 craycc: ERROR in command line >> "--whole-archive" is an invalid command-line option. >> >> I wasn't using --whole-archive at all so I'm just cleared out my whole >> libmesh directory and started with something fresh from git. I'll let you >> know how that goes... >> >> Thanks for your help >> Jim >> >> >> >> >> On Thu, Jun 20, 2013 at 12:50 PM, John Peterson <jwpeter...@gmail.com>wrote: >> >>> >>> >>> >>> On Thu, Jun 20, 2013 at 10:12 AM, Jim Fonseca <jefons...@gmail.com>wrote: >>> >>>> Hi Ben, >>>> Just -g and O0 >>>> The linking problem is on Blue Waters. >>>> I will try opt/devel. There was another group member who had tried with >>>> opt >>>> in the past and he ran into problems (I'm not sure what those were). >>>> >>> >>> What compilers do you use? >>> >>> How do you build/install PETSc? You can post your PETSc >>> config/make/make install commands if it's not too long, or send it to me >>> directly. >>> >>> -- >>> John >>> >> >> >> >> -- >> Jim Fonseca, PhD >> Research Scientist >> Network for Computational Nanotechnology >> Purdue University >> 765-496-6495 >> www.jimfonseca.com >> >> >> > > > -- > Jim Fonseca, PhD > Research Scientist > Network for Computational Nanotechnology > Purdue University > 765-496-6495 > www.jimfonseca.com > > > -- Jim Fonseca, PhD Research Scientist Network for Computational Nanotechnology Purdue University 765-496-6495 www.jimfonseca.com ------------------------------------------------------------------------------ This SF.net email is sponsored by Windows: Build for Windows Store. http://p.sf.net/sfu/windows-dev2dev _______________________________________________ Libmesh-users mailing list Libmesh-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/libmesh-users
