I'm using gcc 4.7
I tried --with-clanguage=cxx for PETSc, but that did not resolve
everything.
Now I get another error message during libmesh compilation:
CXX src/numerics/libmesh_dbg_la-dense_matrix_blas_lapack.lo
src/numerics/dense_matrix_blas_lapack.C: In instantiation of 'void
libMesh::DenseMatrix<T>::_multiply_blas(const
libMesh::DenseMatrixBase<T>&,
libMesh::DenseMatrix<T>::_BLAS_Multiply_Flag) [with T = double]':
src/numerics/dense_matrix_blas_lapack.C:760:98: required from here
src/numerics/dense_matrix_blas_lapack.C:174:3: error: cannot convert
'double*' to 'PetscScalar* {aka std::complex<double>*}' for argument '6'
to 'void zgemm_(const char*, const char*, PetscBLASInt*, PetscBLASInt*,
PetscBLASInt*, PetscScalar*, PetscScalar*, PetscBLASInt*, PetscScalar*,
PetscBLASInt*, PetscScalar*, PetscScalar*, PetscBLASInt*)'
src/numerics/dense_matrix_blas_lapack.C: In instantiation of 'void
libMesh::DenseMatrix<T>::_lu_decompose_lapack() [with T = double]':
src/numerics/dense_matrix_blas_lapack.C:761:55: required from here
src/numerics/dense_matrix_blas_lapack.C:260:3: error: cannot convert
'double*' to 'PetscScalar* {aka std::complex<double>*}' for argument '3'
to 'void zgetrf_(PetscBLASInt*, PetscBLASInt*, PetscScalar*,
PetscBLASInt*, PetscBLASInt*, PetscBLASInt*)'
src/numerics/dense_matrix_blas_lapack.C: In instantiation of 'void
libMesh::DenseMatrix<T>::_lu_back_substitute_lapack(const
libMesh::DenseVector<T>&, libMesh::DenseVector<T>&) [with T = double]':
src/numerics/dense_matrix_blas_lapack.C:763:30: required from here
src/numerics/dense_matrix_blas_lapack.C:592:3: error: cannot convert
'double*' to 'PetscScalar* {aka std::complex<double>*}' for argument '4'
to 'void zgetrs_(const char*, PetscBLASInt*, PetscBLASInt*,
PetscScalar*, PetscBLASInt*, PetscBLASInt*, PetscScalar*, PetscBLASInt*,
PetscBLASInt*)'
src/numerics/dense_matrix_blas_lapack.C: In instantiation of 'void
libMesh::DenseMatrix<T>::_matvec_blas(T, T, libMesh::DenseVector<T>&,
const libMesh::DenseVector<T>&, bool) const [with T = double]':
src/numerics/dense_matrix_blas_lapack.C:767:19: required from here
src/numerics/dense_matrix_blas_lapack.C:737:3: error: cannot convert
'double*' to 'const PetscScalar* {aka const std::complex<double>*}' for
argument '4' to 'void zgemv_(const char*, const PetscBLASInt*, const
PetscBLASInt*, const PetscScalar*, const PetscScalar*, const
PetscBLASInt*, const PetscScalar*, const PetscBLASInt*, const
PetscScalar*, PetscScalar*, const PetscBLASInt*)'
src/numerics/dense_matrix_blas_lapack.C: In instantiation of 'void
libMesh::DenseMatrix<T>::_svd_helper(char, char,
std::__debug::vector<T>&, std::__debug::vector<T>&,
std::__debug::vector<T>&) [with T = double]':
src/numerics/dense_matrix_blas_lapack.C:772:66: required from here
src/numerics/dense_matrix_blas_lapack.C:499:3: error: cannot convert
'double*' to 'PetscScalar* {aka std::complex<double>*}' for argument '5'
to 'void zgesvd_(const char*, const char*, PetscBLASInt*, PetscBLASInt*,
PetscScalar*, PetscBLASInt*, PetscReal*, PetscScalar*, PetscBLASInt*,
PetscScalar*, PetscBLASInt*, PetscScalar*, PetscBLASInt*, PetscReal*,
PetscBLASInt*)'
make[1]: *** [src/numerics/libmesh_dbg_la-dense_matrix_blas_lapack.lo]
Error 1
make[1]: Leaving directory `/home/eftang/dev_software/libmesh'
make: *** [all-recursive] Error 1
Thanks again,
Jens
On 08/16/2013 12:49 AM, David Knezevic wrote:
> I use " --with-clanguage=cxx" in the PETSc configuration. Can you try
> adding that?
>
> David
>
>
> On 08/16/2013 03:24 AM, Jens Lohne Eftang wrote:
>> I want to configure and compile libmesh for complex number support.
>>
>> However I get the following error when making libmesh:
>>
>> In file included from ./include/libmesh/tensor_tools.h:25:0,
>> from src/numerics/numeric_vector.C:33:
>> ./include/libmesh/compare_types.h:65:37: error: template argument 1 is
>> invalid
>> ./include/libmesh/compare_types.h:87:40: error: template argument 2 is
>> invalid
>> ./include/libmesh/compare_types.h:92:39: error: wrong number of template
>> arguments (1, should be 2)
>> ./include/libmesh/compare_types.h:77:8: error: provided for
>> 'template<class S, class T> struct libMesh::CompareTypes'
>> ./include/libmesh/compare_types.h:116:1: error: wrong number of template
>> arguments (1, should be 2)
>> ./include/libmesh/compare_types.h:77:8: error: provided for
>> 'template<class S, class T> struct libMesh::CompareTypes'
>> ./include/libmesh/compare_types.h:116:1: error: template argument 2 is
>> invalid
>> ./include/libmesh/compare_types.h:116:1: error: template argument 2 is
>> invalid
>> ./include/libmesh/compare_types.h:116:1: error: wrong number of template
>> arguments (1, should be 2)
>> ./include/libmesh/compare_types.h:77:8: error: provided for
>> 'template<class S, class T> struct libMesh::CompareTypes'
>> ./include/libmesh/compare_types.h:116:1: error: wrong number of template
>> arguments (1, should be 2)
>>
>> .... lots of similar errors ...
>>
>> src/numerics/numeric_vector.C: In instantiation of 'libMesh::Real
>> libMesh::NumericVector<T>::subset_l2_norm(const
>> std::__debug::set<unsigned int>&) const [with T = std::complex<double>;
>> libMesh::Real = double]':
>> src/numerics/numeric_vector.C:390:16: required from here
>> src/numerics/numeric_vector.C:348:5: error: no match for 'operator+=' in
>> 'norm += libMesh::TensorTools::norm_sq<std::complex<double> >((&
>> v)->libMesh::NumericVector<T>::operator()<std::complex<double>
>> >(((unsigned int)it.__gnu_debug::_Safe_iterator<_Iterator,
>> _Sequence>::operator*<std::_Rb_tree_const_iterator<unsigned int>,
>> std::__debug::set<unsigned int> >())))'
>> make[1]: *** [src/numerics/libmesh_dbg_la-numeric_vector.lo] Error 1
>>
>>
>> I have configured petsc 3.4.2 with
>>
>> --download-f-blas-lapack=1
>> --with-mpi-dir=/home/eftang/dev_software/mpich-install/
>> --with-debugging=0 --with-shared-libraries=1 --download-mumps=1
>> --download-umfpack=1 --with-scalar-type=complex --download-scalapack
>> --download-ptscotch
>>
>> and libmesh with
>>
>> ./configure --enable-complex --enable-shared --enable-slepc
>> --enable-everything
>> --with-eigen-include=/home/eftang/dev_software/eigen-3.1.2
>> --prefix=/home/eftang/dev_software/libmesh_install
>>
>>
>> Any ideas?
>>
>> Best,
>> Jens
>>
>> ------------------------------------------------------------------------------
>> Get 100% visibility into Java/.NET code with AppDynamics Lite!
>> It's a free troubleshooting tool designed for production.
>> Get down to code-level detail for bottlenecks, with <2% overhead.
>> Download for free and get started troubleshooting in minutes.
>> http://pubads.g.doubleclick.net/gampad/clk?id=48897031&iu=/4140/ostg.clktrk
>> _______________________________________________
>> Libmesh-users mailing list
>> [email protected]
>> https://lists.sourceforge.net/lists/listinfo/libmesh-users
> ------------------------------------------------------------------------------
> Get 100% visibility into Java/.NET code with AppDynamics Lite!
> It's a free troubleshooting tool designed for production.
> Get down to code-level detail for bottlenecks, with <2% overhead.
> Download for free and get started troubleshooting in minutes.
> http://pubads.g.doubleclick.net/gampad/clk?id=48897031&iu=/4140/ostg.clktrk
> _______________________________________________
> Libmesh-users mailing list
> [email protected]
> https://lists.sourceforge.net/lists/listinfo/libmesh-users
------------------------------------------------------------------------------
Get 100% visibility into Java/.NET code with AppDynamics Lite!
It's a free troubleshooting tool designed for production.
Get down to code-level detail for bottlenecks, with <2% overhead.
Download for free and get started troubleshooting in minutes.
http://pubads.g.doubleclick.net/gampad/clk?id=48897031&iu=/4140/ostg.clktrk
_______________________________________________
Libmesh-users mailing list
[email protected]
https://lists.sourceforge.net/lists/listinfo/libmesh-users
