It's in the /etc/crontab file where you can set the time for running those 
various updates or use anacrontab for which you must enable the daemon. I too 
switch my computer off at night and I ended up with monstrous files in 
/var/log since the log rotates were set at 4 in the morning and therefore 
never happened.
There is a file where you can set what log-rotate will do such as to gzip the 
files I only can't remember now where that file is.

-- 
Peter

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