Hi,
with the help of Richard Heck and Uwe Nathanael, and own investigation I could 
reduce the list to the following items:
Tools->Preferences->Colors->
        inset frame
        LaTeX error
        Math macro background
        Shadow box
        bottom area
        previewed snippet
Tools->Preferences->Paths->
        PATH prefix
Tools->Preferences->Language settings->Language->
        Language package
        Command start
        Command end
        Use babel
        Global
        Auto begin
        Auto end
I hope there are more people out there in the LyX-world who can contribute.
-- 
Viele Grüße,
Hartmut 
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