On 9 Jun 2006, at 13:32, Luna De Ferrari wrote:
Hello,
maybe you can help me.
I would like to retrieve genes (for human, mouse and fruit fly) that
had no GO terms before July 2005 but have GO terms now.
In summary, I am looking for genes that I classified in June 2005 and
had no GO terms (in Biomart central database). And now I would like to
take the functional classification that I gave to those genes in June
2004 and compare it to the actual GO terms that might have been
annotated/added to those genes in the last 12 months. Any idea on how
to access (in Biomart or somewhere else) a table with:
[Gene ID] - [GO term] - [timestamp of the GO term addition]
Hi Luna,
which BioMart database are you talking about? (start page of MartView)
Ensembl? Uniprot? something else?
Please tell us and we'll be able to point you to the right people
a.
Thank you,
Best regards, Luna De Ferrari
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Computational Systems Biology Group
CISA, Appleton Tower - Room 6.15
Phone: +44-131-6508285
E-mail: [EMAIL PROTECTED]
The University of Edinburgh,
CISA - School of Informatics,
Appleton Tower, 11 Crichton Street,
Edinburgh EH8 9LE, United Kingdom
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Arek Kasprzyk
EMBL-European Bioinformatics Institute.
Wellcome Trust Genome Campus, Hinxton,
Cambridge CB10 1SD, UK.
Tel: +44-(0)1223-494606
Fax: +44-(0)1223-494468
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