On 13 Aug 2006, at 01:52, Durinck, Steffen ((NIH/NCI)) [F] wrote:
Hi,
This query used to work but doesn't work anymore after the last
Ensembl update.
I can't find what is wrong, any suggestions?
<?xml version='1.0' encoding='UTF-8'?><!DOCTYPE Query><Query
virtualSchemaName = 'default' count = '0'> <Dataset name =
'hsapiens_gene_ensembl'><Filter name = 'entrezgene' value =
'1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20'
/></Dataset><Links source = 'hsapiens_gene_ensembl' target =
'mmusculus_gene_ensembl' defaultLink =
'mmusculus_internal_gene_id'/><Dataset name = 'mmusculus_gene_ensembl'
><Attribute name = 'refseq_dna'/></Dataset></Query>
Cheers,
Steffen
Hi Steffen,
it seems that one of the datasets in ensembl mart has lost it
importable.
There are few more configuration bugs in the v 40 ensembl mart
configuration and
these will be fixed mid-release (probably ~couple weeks time)
apologies,
a.
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Arek Kasprzyk
EMBL-European Bioinformatics Institute.
Wellcome Trust Genome Campus, Hinxton,
Cambridge CB10 1SD, UK.
Tel: +44-(0)1223-494606
Fax: +44-(0)1223-494468
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