Hi Simon On Wed, 2007-03-14 at 12:07 +0100, Simon Bellard wrote: > Hello > I have installed BioMart as described in the user manual with the Web API. > I can access to the BioMart 0.5 main page typing "http://myIP:5555"; in my > navigator. > When I click on "Start MartView Session" on the bottom of the page, my > navigator attempt to open http://myIP:5555/biomart/martview, but I have a > blank page. > > The error_log file is updated with these errors : [Wed Mar 14 11:27:04 2007] > [error] [client myIP] (2)No such file or directory: exec of > '/home/bioinfo/biomart/biomart-perl/cgi-bin/martview' failed, referer: > http://myIP:5555/ [Wed Mar 14 11:27:04 2007] [error] [client myIP] Premature > end of > script headers: martview, referer: http://myIP:5555/ > > When I downloaded biomart-perl from CVS, I put it in /home/bioinfo/biomart/, > but in the directory /home/bioinfo/biomart/biomart-perl/htdocs there is no > directory named biomart/martview. I guess this is why I have a blank page on > http://myIP:5555/biomart/martview or may be I missed something during > installation process regarding martview ?
It should not be there as its declared as an alias in httpd.conf and its getting the correct call for cgi-bin directory. Could you double check the file adn directory permissions of cgi-bin adn its contents. Just for testing set them all to chmod 777. Let me know if it works. another possible problem could be having this intermediate directory 'biomart' or name it differently. If that turns out to be a fix, let me know and we fix this Alias name getting confused with directory BIOMART. Cheers Syed > I would be very grateful to you if you could give me some clues or directions > to resolve this problem. > > I thank you in advance. > > Regards, > Simon Bellard > -- ====================================== Syed Haider. EMBL-European Bioinformatics Institute Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK. ======================================
