Hi!
I can't install standalone biomart on ubuntu 7.04. Could you please help
me? Output from configure script follows below.
/Joel Hedlund
Phd Student
IFM Bioinformatics
Linköping University
Sweden
> $ perl bin/configure.pl -r conf/registryURLPointer.xml
Do you want to install in API only mode [y/n] [n]:
Checking prerequisites ...[Looks good]
Use of uninitialized value in string ne at /media/sda8/yohell/download/biomart/biomart-perl/bin/configureBioMart.pl line 84.
Use of uninitialized value in regexp compilation at
/media/sda8/yohell/download/biomart/biomart-perl/bin/configureBioMart.pl line
86.
rm
/media/sda8/yohell/download/biomart/biomart-perl/conf/templates/default/*.ttcrm:
cannot remove
`/media/sda8/yohell/download/biomart/biomart-perl/conf/templates/default/*.ttc':
No such file or directory
APACHE: /usr/sbin/httpd
HOST: test.biomart.org
PORT: 9002
PROXY:
LOCATION: biomart
You can change the above configuration by editing
"biomart-perl/conf/settings.conf"
No valid httpd binary specified, skipping Apache version and mod_perl checks. No
httpd.conf will be generated.
Use of uninitialized value in string eq at
/media/sda8/yohell/download/biomart/biomart-perl/bin/configureBioMart.pl line
182.
Libdir /media/sda8/yohell/download/biomart/biomart-perl/lib is not in @INC,
adding to @INC
Processing Cached Registry:
/media/sda8/yohell/download/biomart/biomart-perl/conf/cachedRegistries/registryURLPointer.xml.cached
[EMAIL PROTECTED]:/yolocal/download/biomart/biomart-perl$
