Hi Syed,
Are you sure about resultspage.tt? - this file doesn't seem to be used.
Regards,
Roger
Syed Haider wrote:
Hi Roger,
to manipulate the results for say sorting, filtering etc etc, have a
loot at
biomart-perl/conf/templates/default/resultspage.tt
you can modify this panel according to your needs.
cheers
syed
On Mon, 2008-02-25 at 17:41 +0000, Roger Hull wrote:
Hi,
The URL API provides a good solution for canned queries which can be
implemented as standard BioMart queries. But I also need to implement
another type of canned query, which takes data from a BioMart and
post-processes it in various ways. I can do this using the perl API,
for example, and display the results in a new web page.
However, what I would like to do is to make use of the existing
MartView features for displaying and downloading the data, so that the
user has a more uniform experience. Also, for some types of canned
query, I would like the user to be able to change the filtering and/or
attribute selections and press "Results" to get a new set of
post-processed results, displayed in the MartView page.
Is there some function that I could hook into which delivered the
results internally within MartView? Of course I want to minimise the
code changes, for future maintainability, but if there is one place
(or a small number of places) where I could insert a function call
which would post-process the data, this should be manageable.
I also need to do the same for the Count function. Currently the Count
returned is "how many rows in the main table of the dataset match your
filters so far". In the case of PRIDE, this is the number of
experiments. But often I need to know the number of rows returned from
the query, not the number of rows from the main table - for example I
want to know the number of distinct proteins or peptides which match
my filters.
Regards,
Roger.
